+Marker Data: AFAT02D02

Crop bunching_onion
Population SaT03
Linkage Group 1b
Marker Type SSR
Map Position 22.3
Annotation
Source Name AB564895
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2011) Theor Appl Genet 122:501-510

motif (ac)8at(ac)6a(ta)10tt(tg)4
PCR product (bp) 298
fwd primer AFAT02D02-U
fwd primer seq. agactccttcgataggctttgttg
rev primer AFAT02D02-L
rev primer seq. gtttcacccatttgtgttgatttggtga
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB564895
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 286 294
F1s-7s-17s-3s-1
J1s-14s-23s-9 290 290
K1s-5s-2s-2s-4s-5
Chiang_mai 250 250
Kaizuka_Wase

Population Linkage Group Position
SaT03 1b 22.3

DB Program Definition E-Value

EST Name Species Strain