+Marker Data: AFAA06A04

Crop bunching_onion
Population SaT03
Linkage Group 1b
Marker Type SSR
Map Position 37.2
Annotation
Source Name AB564880
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2011) Theor Appl Genet 122:501-510
motif (at)3ttatatgtatgta(tg)9
PCR product (bp) 249
fwd primer AFAA06A04-U
fwd primer seq. acaatacattaaactcaaagcaattcatttcc
rev primer AFAA06A04-L
rev primer seq. gttttgctccagattcgtcgtctt
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB564880
annotation
similar marker
product size in J 230
product size in Kaizuka-Wase 230
product size in Iki-White 240
product size in Tender Pole
Line allele-1 allele-2
C1s-11s-25s-7 250 250
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 245 245
F1s-7s-17s-3s-1 250 250
J1s-14s-23s-9 255 255
K1s-5s-2s-2s-4s-5 250 250
Chiang_mai 246 246
Kaizuka_Wase
Population Linkage Group Position
SaT03 1b 37.2
DB Program Definition E-Value
EST Name Species Strain