+Marker Data: AFAA04F09

Crop bunching_onion
Population SaT03
Linkage Group 1b
Marker Type SSR
Map Position 32.7
Annotation
Source Name AB564871
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2011) Theor Appl Genet 122:501-510

motif (at)6(ac)11
PCR product (bp) 225
fwd primer AFAA04F09-U
fwd primer seq. atccctaatttactctaacttccccctacatatt
rev primer AFAA04F09-L
rev primer seq. gtttcttgttggaattgtagatttatgtgagtttgat
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB564871
annotation
similar marker
product size in J 230
product size in Kaizuka-Wase 200+230
product size in Iki-White 230
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 200 220
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 220 220
F1s-7s-17s-3s-1 220 220
J1s-14s-23s-9 220 220
K1s-5s-2s-2s-4s-5 200 200
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
SaT03 1b 32.7

DB Program Definition E-Value

EST Name Species Strain