+Marker Data: AFA09B05

Crop bunching_onion
Population SaT03
Linkage Group 1b
Marker Type SSR
Map Position 49.9
Annotation
Source Name AB564818
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2011) Theor Appl Genet 122:501-510

motif (ta)3cta(gt)13ag(ta)3
PCR product (bp) 262
fwd primer AFA09B05-U
fwd primer seq. agatcaagcgacatatgagaaagca
rev primer AFA09B05-L
rev primer seq. gtttgcctgcaagtcgggttagtag
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB564818
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 260 260
F1s-7s-17s-3s-1
J1s-14s-23s-9 260 260
K1s-5s-2s-2s-4s-5
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
SaT03 1b 49.9

DB Program Definition E-Value

EST Name Species Strain