Crop | bunching_onion |
---|---|
Population | P2 |
Linkage Group | D05-1 |
Marker Type | SSR |
Map Position | 21.8 |
Annotation | |
Source Name | AB499325 |
Source Type | genomic |
Source Sequence | |
Developer | NIVTS |
Document | Song et al. (2004) Breed Sci 54:361-365 |
motif | (ac)13a(ta)7tcacacttata(at)3 |
---|---|
PCR product (bp) | 237 |
fwd primer | AFS099-F |
fwd primer seq. | tgcccctcattaataacaacatgac |
rev primer | AFS099-R |
rev primer seq. | ttaatcgcattgacaaagtttattt |
fluor. primer | AFS099-F(PET) |
dye | PET |
fluor. Primer seq. | PET-tgcccctcattaataacaacatgac |
PCR condition | 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C |
polymerase | Toyobo rTaq DNA polymerase |
Genebank No. | AB499325 |
annotation | |
similar marker | |
product size in J | 240 |
product size in Kaizuka-Wase | |
product size in Iki-White | |
product size in Tender Pole |
Line | allele-1 | allele-2 |
---|---|---|
C1s-11s-25s-7 | 231 | 239 |
Cho1s-1s-2s-2s-8s | 245 | 245 |
D1s-15s-10s-8 | 243 | 243 |
F1s-7s-17s-3s-1 | 241 | 241 |
J1s-14s-23s-9 | 229 | 229 |
K1s-5s-2s-2s-4s-5 | 235 | 235 |
Chiang_mai | ||
Kaizuka_Wase |
Population | Linkage Group | Position |
---|---|---|
DJF2 | Chr1b | 53.5 |
FA | 1b | 27.2 |
KiCF2 | 1b | 81.2 |
P1 | J05 | 23.5 |
P2 | D05-1 | 21.8 |
DB | Program | Definition | E-Value |
---|
EST Name | Species | Strain |
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