+Marker Data: AFA18A02

Crop bunching_onion
Population KiCF2
Linkage Group 7b
Marker Type SSR
Map Position 79.6
Annotation
Source Name AB564850
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2011) Theor Appl Genet 122:501-510

motif (ac)10(at)3
PCR product (bp) 180
fwd primer AFA18A02-F
fwd primer seq. aaggctacgcaaagaaatcaccaa
rev primer AFA18A02-R
rev primer seq. gtttacctgcacctgtttgcttgagtta
fluor. primer AFA18A02-F(NED)
dye NED
fluor. Primer seq. NED-acctgcacctgtttgcttgagtta
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB564850
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 190 190
Cho1s-1s-2s-2s-8s 190 190
D1s-15s-10s-8 190 211
F1s-7s-17s-3s-1 182 190
J1s-14s-23s-9 186 190
K1s-5s-2s-2s-4s-5 186 186
Chiang_mai 500 500
Kaizuka_Wase

Population Linkage Group Position
FA 7b 111.2
KiCF2 7b 79.6

DB Program Definition E-Value

EST Name Species Strain