+Marker Data: AFAA07H05

Crop bunching_onion
Population KiCF2
Linkage Group 6a
Marker Type SSR
Map Position 316.6
Annotation
Source Name AB795071
Source Type genomic
Source Sequence
Developer NIVTS
Document Wako et al. (2016)

motif (ta)3tgtgtctcagaatt(ta)3tgtgggtgaa(tg)7tt(tg)3
PCR product (bp) 164
fwd primer AFAA07H05-U
fwd primer seq. aggcagtgtttagtgttgggttga
rev primer AFAA07H05-L
rev primer seq. gtttgcacgtaagaaaaaccacacccat
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB795071
annotation
similar marker
product size in J
product size in Kaizuka-Wase 170+180
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 170 170
Cho1s-1s-2s-2s-8s 170 170
D1s-15s-10s-8 170 170
F1s-7s-17s-3s-1 170 170
J1s-14s-23s-9 172 172
K1s-5s-2s-2s-4s-5 172 172
Chiang_mai 157 157
Kaizuka_Wase

Population Linkage Group Position
KiCF2 6a 316.6

DB Program Definition E-Value

EST Name Species Strain