+Marker Data: AFB02G04

Crop bunching_onion
Population DJF2
Linkage Group Chr7a
Marker Type SSR
Map Position 52.1
Annotation
Source Name AB499472
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tc)18
PCR product (bp) 167
fwd primer AFB02G04-U
fwd primer seq. acacgttacagtgggcagaaacaa
rev primer AFB02G04-L
rev primer seq. gtttgcagagggtggattagtcatttgg
fluor. primer AFB02G04-F(NED)
dye NED
fluor. Primer seq. NED-acacgttacagtgggcagaaacaa
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499472
annotation
similar marker
product size in J 170
product size in Kaizuka-Wase 160+170
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 170 170
F1s-7s-17s-3s-1
J1s-14s-23s-9 175 175
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr7a 52.1

DB Program Definition E-Value

EST Name Species Strain