+Marker Data: AFA18G02

Crop bunching_onion
Population KiCF2
Linkage Group 5a
Marker Type SSR
Map Position 28.4
Annotation
Source Name AB564853
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2011) Theor Appl Genet 122:501-510

motif (ta)3gtgcatatcaaagtgcagacatgaatat(ac)11
PCR product (bp) 286
fwd primer AFA18G02-U
fwd primer seq. agaaaacaacagttgcaaaccagg
rev primer AFA18G02-L
rev primer seq. gtttctttttccctctatgacttcggcac
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB564853
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s 294 294
D1s-15s-10s-8
F1s-7s-17s-3s-1
J1s-14s-23s-9
K1s-5s-2s-2s-4s-5 292 292
Chiang_mai 282 300
Kaizuka_Wase

Population Linkage Group Position
KiCF2 5a 28.4
SaT03 5a 0.0

DB Program Definition E-Value

EST Name Species Strain