+Marker Data: AFA10G05

Crop bunching_onion
Population KiCF2
Linkage Group 5a
Marker Type SSR
Map Position 121.5
Annotation
Source Name AB795051
Source Type genomic
Source Sequence
Developer NIVTS
Document Wako et al. (2016)

motif (ac)12a(ta)9
PCR product (bp) 216
fwd primer AFA10G05-U
fwd primer seq. acagactaaaaggaacccaactgc
rev primer AFA10G05-L
rev primer seq. gtttggtttgaatgtggtcagtggtct
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB795051
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s 195 195
D1s-15s-10s-8
F1s-7s-17s-3s-1
J1s-14s-23s-9
K1s-5s-2s-2s-4s-5 188 188
Chiang_mai 210 210
Kaizuka_Wase

Population Linkage Group Position
KiCF2 5a 121.5

DB Program Definition E-Value

EST Name Species Strain