+Marker Data: AFA02B05

Crop bunching_onion
Population KiCF2
Linkage Group 5a
Marker Type SSR
Map Position 30.5
Annotation
Source Name AB795039
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2015) Mol Breed 35:55

motif (tg)3aaca(ta)8(tg)17aagtgaaaccagagg(caa)3
PCR product (bp) 258
fwd primer AFA02B05-U
fwd primer seq. agcaacggtagagagatgatggag
rev primer AFA02B05-L
rev primer seq. gtttgaaatcccctgcgagattgtagt
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB795039
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s 258 258
D1s-15s-10s-8 256 256
F1s-7s-17s-3s-1
J1s-14s-23s-9 260 260
K1s-5s-2s-2s-4s-5 250 250
Chiang_mai 242 242
Kaizuka_Wase

Population Linkage Group Position
FA 5a-2 33.9
KiCF2 5a 30.5

DB Program Definition E-Value

EST Name Species Strain