+Marker Data: AFA11D02

Crop bunching_onion
Population KiCF2
Linkage Group 1b
Marker Type SSR
Map Position 84.5
Annotation
Source Name AB564830
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94

motif (ta)4tgcatgtatg(ta)6cacatatc(tg)9tt(tg)4tccg(tg)3
PCR product (bp) 160
fwd primer AFA11D02-U
fwd primer seq. acggcaaacctgttaaatcc
rev primer AFA11D02-L
rev primer seq. gtttatacataaacacaaacacacacg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB564830
annotation
similar marker
product size in J 170
product size in Kaizuka-Wase
product size in Iki-White 170
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 165 169
Cho1s-1s-2s-2s-8s 169 169
D1s-15s-10s-8 169 169
F1s-7s-17s-3s-1 165 165
J1s-14s-23s-9 165 165
K1s-5s-2s-2s-4s-5 165 165
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
KiCF2 1b 84.5

DB Program Definition E-Value

EST Name Species Strain