+Marker Data: PM20

Crop pepper
Population KL-DH
Linkage Group KL11
Marker Type SSR
Map Position 65.02
Annotation
Source Name AY161301
Source Type misc cDNA
Source Sequence ATGGAAATCATTATTCTCTCCAAGGAAAAAGTGAAGCCAT CCAAACCAACACCTCCAAACCTAAGAAACCACAAACGATG CCTATTTGATCAATTAGTACATGAAACATGCATCTCACCT ATCTTCTTCTACAACAACAAGAAGAAGTCACTTTCAGAAA TAAATAACGCAAATATTATTGATAATCGTCTCAAGAATTC CCTCTCGGAGACACTAACGTTGTTCTATCCGCTTGCTGGC GAGCTCAGTTCAAAAAATTCAACTTTTGTGGATTGTAATG ATAATGGAGTTCTTTACGTGGAGGCTCACGTAAAGGGCGT TACTCTAGGTGAGTTCCTTCAAAACCCTGATCTTCCACAA CTCATTAAATTCCTTCCACAAAATGCCAGCATGGGTAGCA AGATGAACTATGTTCAAATTCTTGAAACCCCAGTTTCTGT CCAAGTTACTAGATTTGATTGTGGTGGGGTTGCAATTGGT GGAGTTTTGTTACATGACCTCTTGGATGGAGCTACCATGA GTAAATTTTTCAACACATGGGCTATGATTGCACGTGGCGA TGATGATGGGATTGAAAAGATCACGACTCTTGATTTCACA TCATCATCACTATTGTTCCCGAATCAAAATCTTCCTCAAA ATTTTCTGGAAACTAGGAACGCGTTACTTTTCAACGAGGA GAAGTCCCTTCTTAGAAGATTCGTGTTCAATGCCATAGCA ATTGAAGCCATTAAGATGAAAGTGTCTAGTGAAAATGTAC CTAATCCAACTCGAATCGAGGCACTAACAACTTTCATTTC GAAGCACATGATTTCAGCAACAAGAGGAGTAAAGGAAATT AGCTCAAGACCAATATGCATGGTGACACATATAGTGAACT TGAGATCAAAAATTTATCCACAATTGCTTAATGCTTTTGG GAATTTAATCTTTCTAGCAAAAAGTGATTATATAGAAATG ACTGAAGTGAAGTTGCCTCACTTGATGGGAATAGTGAGAG AGATGTTTGGGGATATTAATAGTGAAAACGTAAAGGCATT ATTAGAAGGTGATAATGCTCTTGATTTTGTTTTGGATATG GCAACACAAGTTGGGAAGTTGTTGCCAGTATTAGATACTT ACAAGTTCTCAAGTTGGTGCAATCTTGGACTGTATGATGT TGATTTTGGATGGGGAAAACCTATTTTTGTTGCTCCTTTC ATGGACACTATAGGCTCATTGAATAAGCAACAAATTATTC TGGTGGAAAATGGAAGGAATGATGGAATTGAGGCGTGGAT AGTTAGAAACAATGAAGAAATGCTGGAGTTGGAGAATGAT GAGGAATTTCTAGCATATGCATCTCTAAATCCTAGTGTCC ATGTCCCTTGAATTATTCAATTATATTGGATGCAATAGTC ATAAAAAGATGGAAATTTCTGACGTATGTTCGATAGAAAA CTCATCAAAATTTGGCTCGTTAGCAACGTTTCCCATGGAT TTCTGATTGATTATTCCATCAGAAATTTTCGTTTCTTAGT AGTGTGTGCTCAAATCTATATATATATATATATATATGGA GACACTGGAGGATGCTGTGGCACCTCTCAATGACCTTTAT TTGTATTTTTCTTTTTTCTCTTTTTTTTTTGGGAATTTCT CCCATATATTTTGCATTTATGTGTTATATATAAAGTCCCC CAAAAATGCTTAATCAATTCCCATAAATCTAAATCGTATT TATTTCAATTGATATAACTTTCACA
Developer Miyazaki ARI
Document Sugita et al. (2006) QTL analysis for resistance to phytophthora blight (Phytophthora capsici Leon.) using an intraspecific doubled-haploid population of Capsicum annuum. Breed. Sci. 56: 137-145
old source name
typing_method 13% PAGE
motif (ta)10
PCR product (bp)
fwd primer
fwd primer seq cgtttcccatggatttctga
rev primer
rev primer seq ggtcattgagaggtgccaca
PCR condition 95C_1min->(94_30s->55C_30s->72C_1min)x35->72_5min->4C
polymerase Native Taq
comments QV: estimated by sequencer
Line allele-1 allele-2
K9-11 123.7 123.7
MZC-180 (selfed LS2341) 127.7 127.7
Population Linkage Group Position
KL-DH KL11 65.02
KL-DH_2024 KL11 64.99
KL-DH_2024_R2 KL11 64.99
DB Program Definition E-Value
EST Name Species Strain