+Marker Data: TC3979

Crop pepper
Population KL-DH
Linkage Group KL11
Marker Type SNP
Map Position 128.45
Annotation
Source Name
Source Type CaGI.release_2
Source Sequence
Developer NIVTS
Document

typing_method Tm-Shift
Marker_Class misc_cDNA
STS_primer_fwd gtggcaaggtgttaagtgaggagg
STS_primer_rev gcttctccagcttctctttctcca
amplicon_seq NCAAGGTGTTAAGTGAGGAGGAAAAAGCTGCTGAAAATGTCTACATCAAGGTAGCTCTTTAGTTGTGATTTACTGATTCATAACTTACCTGAGGTGTAATTACTGCAATTATATTTGTTTGAAAATTATTTTGCATTCTGTTGTTATATTTCTCTTTTTGGCAAAATGGATCCTGGTCTTGCTTTCTTTTAGACGTTCCATTTTTCTTATAATTTCATTTTGCTCATTCGTGATTTGCATGTACCATGTATACCTTCTTGCTGGGGAGTCTTGGGGCAATCCTTTTATAGTAAATCTTGGAAATTCTTTTATGTTAGATTTTGCGCTATTGCTGTTTTTGGAATCATAAGTTGCAGGTTTAAGCTGTCACTTAGTTCCGAAGTGTTCACTCATGAGATACGTTTCTGTTTTCTCATCTTTTCTAAATGGTATTTTTTTCACTTTACAGAAAATGGAGAAAGAGAAGCTGGAGA
SNP_position 138
allele_1 T
allele_2 C
ASP_primer_S GCGGGCTATTTGTTTGAAAATTATTTTGCATTT
ASP_primer_L GCGGGCAGGGCGGCTATTTGTTTGAAAATTATTTTGCATTC
common_primer AAGAAAGCAAGACCAGGATCCATTTTG
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2

Population Linkage Group Position
KL-DH KL11 128.45
KL-DH_2024 KL11 129.35
KL-DH_2024_R2 KL11 129.35

DB Program Definition E-Value

EST Name Species Strain