+Marker Data: TC4670

Crop pepper
Population KL-DH
Linkage Group KL03
Marker Type SNP
Map Position 44.84
Annotation
Source Name
Source Type CaGI.release_2
Source Sequence
Developer NIVTS
Document

typing_method Tm-Shift
Marker_Class misc_cDNA
STS_primer_fwd CGTTATCGGTAACAGTGAACGACG
STS_primer_rev TTGTCAAACCCGGTTATAGCCAAC
amplicon_seq NNNNNNNNNNNNNNTATTTCTGGAAACTTCGTTGTCGTTGATCATGATATCTTCTGGAGCTCCGATCATCCAGGCATCGATTTCACTGTATGAAACTATATTTTTCTTATGCTTAATTGTGCAATTTTTTATATAGATTTATGTGTTAATTGTTAGTAGTTTTATCGATTTATGCATTAATTGTTAGTGATTTTATCGATTTATTCGTTAATTGCTAGCAATTTTATCGATCTATTGTTTTGGTGCTTAATTCGTCACACAAGTAAAACTAGAAAAACTGAAAATCATCGTCGGCGCTGGAAATGGGAAACGGTAACCGGAGACGGAATCAAGCGGTCAAAAGTTTGGCTTTGATATCAATTTTGCTATTCAGTTTCGTAAACGACATAACGGCGTTATCGGTAACAGTTGAAGATGAGGAATGCGTATAGGAATACGTTCTCTATGAATACGACACGATTTCTGGAAACTTCGTCGTCGTTGATCATGATATCTTTTGGAGCTCCGTTCATCCCGGCATAGATTTCATTATATGAAACTTTATTTTTCCTATGCTTAATTGTTAGCAATTTTATTGATCTACGTGTTTGTGTGCTTTTTGAAATTTGATTTTAGATGTGCATTAGTTTTTCTCATTTCTCTTTAAGATTTTGGTCATACTGGAAGCTATAGGATCAGGAATGAGGATATATCCATGATAAGGTGGGAGTGGCCTCCTTGGTGGATAGGATGAGGAAAGTGAGATTGAGATGGTTTGGACATTTNGATGTGGAGAAGCGCAAAGGCCTCAGTTAGGATGTGCGAGAGGTTGGATANTAGTGAGTGTGAAGAGAGGTAGAGGTAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGATTGGCTTNNCTTTCTCNTACTCTAGCGANTATCATTTATTTGGTAANTGCTTNGATGGTATNGGGACTGGCTAGCTTGTAAAACTGGATTGGTGGATTTACTTTTAAATTATTTACTGCCAGTTATAAGCAACTATCCATTTTATATTTGAACCAACTAATGCTAATTCCGAAAATGGTTGCGGCAAAAATGGTCCTTTTGGTGACTTAACCACAATGGATTTATTAATGAGGCATATCATTCTCCGAAGNNNNNATGCAATANCTGATATCAAACCAATTTATGCTGATTATAGGCTTCATTAAAATATTACAACGTGTTAATTCATGGAGACTTTTAGCTGTAATGGTGGCTTTTAGACAGGTTAATAGCTTTTAAANGCTACAGTAAGGTAAACTTTCTGCTGCGTTCTAGGAATCCTTTATCTAATTCCAAGGTTATATTAGTACTCTTTCCTATGTATCTTCCCTTCTTATGAGAATGATGGAAAACAATGAGAAGGTAAGAGTTAAGACTTTGTAAGCACCTTGTCCGGAAATAGTTAAATTTTCTCTTATTCAAAATTTTCCATTGGTTGGNATTCTGTTTATCTGCTTTCTTCTGAACCTTAACTGGTGTTTTTGGNCCTATACGTACTTCTTTAGCATGATGGTCGTAGAGTCTCCCTGTAGCTTCTTCTGTTTACATTTAAGTCATTGCCGTTAACTCATCATGCCATCTACTGCTCATCTGATGTGTGTTAATCTGGTGCAGCTAACGAGAGCACACGGAAACGTGTTATATTTTACACAATTGGAGAGTATCTGCTGCTTATATTGGCAAGTGGACTTCAGGTTG
SNP_position 1537
allele_1 T
allele_2 A
ASP_primer_S GCGGGCTTCTGAACCTTAACTGGTGTTTTTGGA
ASP_primer_L GCGGGCAGGGCGGCTTCTGAACCTTAACTGGTGTTTTTGGT
common_primer CAGGGAGACTCTACGACCATCATGCTA
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2

Population Linkage Group Position
KL-DH KL03 44.84
KL-DH_2024 KL03 44.84
KL-DH_2024_R2 KL03 44.84

DB Program Definition E-Value

EST Name Species Strain