+Marker Data: gg10228_2123

Crop eggplant
Population LWAE2012
Linkage Group E_12
Marker Type SNP
Map Position 57.71
Annotation
Source Name FKO03-01.6293.C1
Source Type 43k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method GoldenGate
454-Contig_ID eggplant_rep_c10228
454-Contig_seq (unpadded) TGAGGAAAGGTATTGTGTATTCTTCGACCTCCCACAATCCACTTAGTTTGCCCGTATATTGAACAAGAAGAATGATATGTAGTCTGGAATATTTGCAGTGGATTAGCTTTGAAGAAGCTTGACAAGAAATTGGAAAGAACCCTTTTGCATTCGTATCGCAAGGTAACAATTAGTTTTACATGATGTGGACCTTGAGCGCTGATGCGTTTTCCCACTGAATATAGTTGTGAATAAGACTTTTCACTTGAACACAATTATGCAAAGGCTGGAGTGTCTCGTCTTTTNTGTGATACTGGAGTACTCTATAATTATGCTTTAAATAGCTGCCAGTTGATTATCATATAGAAATATTGTTTTCTTTTGGCTACAGGATTTGACATCTCAAGTTTCTGCTGAAACGGATCCAGTTTCCCTCTTACCGCGAGTTATATCTCTGCTTTATGTACAGGTCAGCCCTAATGCTCTGTCTCCAATCCACTTCTCTCTTTGTAGCATATCGTCCTTATAGATTATCCTTATATCACTCTTTTGATCTTTCCTCCTTANTGANTACATAGGTTTATGGAAAAGCTCTTCAGGCTCCTGGTAGGGCCATTTCAGCTGCTGTCTCCCGGTTAAAGGTACAATCCGTAATCTTTTNTACACTACACAAACTTTGTCATCATTAATGAAGACATACAGTGGATTATCNAAAAGGTCTAAAAGTGTGATGTACTCTAATTGCAATAGGAGATTGGATGTCCCTCTAACAAACTATGTCCCATATGGCACTCATTTCTCGCTAACTTAAAAAGGAGCCTGGTATTAATGAATTTAGCCTACATCNAGTAAAACTAATGTTACCATCACGACTACTTTTCAGGATAAGCTAGNATGAGACTGCATTCAAAATGTTGGCTGATTACCATNAGTGGAACAGTGAGCATCCTGGCTCTAATGGCTGCTGCAACTGGCGATGTGAGTTATTCCTGTCCTTATGATATGATCATTTGTTTTTGATAGATAAACAAAAGTTGAAGAATGCTAGTTTCCGTTTACAAGTCCAAAAATGTCACTCATTTGTTCATTTTGTATAACTTTGTATTGTCTATAGGATGAAGATTGTACATCTGACAGAATTTTGAGCAANAGGGAANATGTTAGAGGAATTGATGCTTGCGTTGAAGGNGATTAGTGNCTAGGTACCTCACAGGCGTAGATTCAACTTCAGGGAACACTTGCGACATATGAAGATGGAAGAAACATGCACATTTCTTTGCTAACTAGAGTTAGAAGAGTGGCTAAACATCAAATCGCTAGCAAGTGATTTTCTTATGAATTTTTAGTCCTCGTCAGACTTTTAGATGCTGTATGTATCTGCTTTATACAAAGTTTGCATAATCATCATAGATTTTTACAAATAGCATTCTTTTATTTTTCAAGAAAATATAAAATCTATTGTCTAATCTAGGGTACACCTCATCTAGGGTACATCTTACCTTCTCCGGACTCCNACTTGTAGCNACTATATTGGTATGTTGTTACATGAAGAACCAAATCTGTGCTACCACACAGATGAACATCNATCTTATTTTTAGTCTCTTTGCACGTCTCTAGCACTACTAGCATTTTTGAAANTAAACCCGTTTNGTACTAAAATTATTGTACACAGGATTGGAGGATATTTTGCTATATTTAATGTATTTTTANGTTTAAGATCTTAAGATCNAAAAATCTTCTTGACTTACTAAATTCTGTGATCAAGTTAAAATAGAATATACAAACTGAAAAAGAGGAAGTATACAATATTTGTATTCGTTCGTAGACGAGCAGTGAAAAATTAGTCAACAATTATCACAATTCACACATCTAAAAGCTTTTACTTTTTTNNNNAAAAAAAAGNACGATGGCAAAGATCTTCCAGCTTTTTCCAGACCAAAAANAGTAGACCAACAGAGAACGGTCAGAAAGAAGACCAAAAACTCGGCTCTAGATTTTCTTGCNTTTTTTTTATTGTGCACCCGACTTATAATTTTCTTGTTCTCTTTGTACACAATGTTGAGGGTNTGAAGAAANATGCCAGCTTCACAACATCTTGTTTTGCAGTAATTACAATTCTATAAACAGTGCATTAAAGATGGCAGGTCCACCTATGAAATTCTGAGAAATACATTNTATTTCCGATTTATGACATGTCTAGAGGATACAGGGAACTGAATGACTAAGACAACTCTAATTTTAACAATTGCTGCCAACAGCCCNAATTGAGCAGAAACTACAGTTGAACTACCTGGCTCCTAGATCAAGGAATATATTGAAAATGTACACTTATGAACTGGCACTCGAAACTAGTGTTGAGGTAAAACAGGTCTTTTTNTCCNAGCATTTCATAGTGGAGGACAAAATTATCCTGCATTTAAGTTGCAGACGAGTTAAAACACTGTAAACTTCATAAAAACTGATGTGCCAAACTTGGCACATGCAAACACAACTAATACAGGAACTCAAAAATTGTATTATGATATCCATACCTTGCGGAGTGTCTCCCATGTGTTTGGATCAAAACAAATGTAAGACCCTCTCTCATATGCATTCGTCTTGACAAGAGGCTCCATGTTGGCAACCCTCATAAACCACAACCGATGTTCTCTGTGNATAAAACCAGCCGCGGTTATACCTGCACACAGAAAATTCAGACTGCTATTAACTAGGCTTCAGCTGCGCGCTTGGCACATTGNCACATCCAGAAGGTCAACTACGCAGTAAGGGGAGTATTCTAACATGCAATAGCTGACAAATTAGCTCTCAGGAATACAGTAGAAGAAAATATGCACCTAAGAGCAACCAATTTTGTTGAGA
SNP_position 2123
sequence_for_GGdesign TTCACAACATCTTGTTTTGCAGTAANTACAATTCTATAAACAGTGCATTAAAGATGGCAG[T/G]TCCACCTATGAAATTCTGAGAAATACATT-TATTTCCNATTTANGACATGTCTANAGGAT
GGdesign_Final_Score 0.893
Ilmn_Id 10228_2123-0_B_F_1967852517
allele_1 T
allele_2 G
Line allele-1 allele-2
Population Linkage Group Position
LWAE2012 E_12 57.71
DB Program Definition E-Value
EST Name Species Strain