+Marker Data: gg16317_1147

Crop eggplant
Population LWAE2012
Linkage Group E_11
Marker Type SNP
Map Position 50.881
Annotation
Source Name FKO03-01.4543.C1
Source Type 43k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method GoldenGate
454-Contig_ID eggplant_c16317
454-Contig_seq (unpadded) AAAAAAATTAAATTTCCCAAAGGTGGTTAAAGGCTTAAAGCCATCAGTATCATTCGGTTTAGGTTAATATTCCAAAGATTATAAGATATGGNNNNNNNGGCAATTAAAATATANTTTTCTCTGCTTGACCAAATTCTGGAAAAAACAANACNGACGTAAAATACTTTAGATATTGTTTAATGTGCCACCAAAANNAAANATTAAGTCAATCCTTGGCTGTCTCCTTCAAATTATTGATTAAAAAAAAGAGAATTCCCTTAAAAGGGATCACTCATATGGACTTAAATAATACTCCGATCGATTGATATTTATTATTTCAGTTCAGAATATGATTAATTTAACATGGACTATATGAACCCCTAGTAATTTATCAGATAGATTNGATAAGTCAGACATTCTCGATCCACCATAAATAATTATTTGAAGACAAATAAAAGGATAATTAAAATCCCCNCATTAGCCATAAATCCCCCATCAACATAAATAATTTGGCCAGTGACATATGAAGAAGCAGGAAAACAGAGAAATGCAACTACTGCTGCAAGTTCTTTGGGTTCTCCCATTCTGTGCAGAGCACTCCTATCAATTAGCTTCTGCAAATTCTCTTTTTGTTCTGGATCTTGCTAGNACNNNNNNNNNNNNNNNTCAAAAATGAAATTTAGAACCCTTTTAACCAATATAATACGTAAATAAATATTCAAATTTGACTTTAGCTGGCAAGTAAACATTTCAATTTTGNAGAGTGCACATTCAGACACCTTCACATTCCAACTCATTTAGATTTGTGTCTCGTGGACACGTACTTTGGTATCTAGATGATCATTATATTAGTTTGAGTTGAATATATTAGTTTGAGTGTTCAACTGACACGAGAAAAAACGATATTTAAGTGCAATGATGATATTTACAATAGTCATTTCGACCATAGAAGATGNCAATAACCCCTGGTGCAACACCATTGACACGAATGTTGTNCCTTTGCCAACTCAAACGNCCAAGCTTCTTGTGAGTTGATCGATTGCTCCTATTNGCCAACAAATTACATGATTAGTACCNAAAAAATNATCTATCAATTTACAAAATTCTTCATNTCTTTTTTTTTNNCTCAAATTGAAAANTTTTATCAACGTATAATAAATGGCGAAGCCTGATTTCAAGGGTGGTCAGTTCAACACTTTAATTTAGTCTCAAAATTATACATACATACAAAAGATCTCATGATAATCTCATTTAGCTATGGATTAGCGATAGATTTTAAGAAAAATCTTTTAGCTAGGAGATTTCTCGCAACACATTAGTAGGGATTACTGACAAATTTCATAGCTAATTCCATGTTTTTTAGTAGTATGCCATTTATATATGCTCCTTCTGTCTCATTTTACGTGGGATCCTTTCATTTTTAGTCTATCTCCAAAAGAGTGTCACCTTACTATAACTACAGGTAATTCAACTTCTTAAGATTCTATTTTACCCTTCATGAAATGATTTACAACTACAAAANATATCTAAGGATTGTTTTGGACCATAACTTTCAAAAACTTTCCTTTTCTCTTAAATAACGTATCAAATCAAAAGGTACCACATAAGATAGATAGAAAGAATAATAAATTTTGAACACGCTTAATGAAATTTCTGCATTTACCTTTGGTTGCTCCATAAACAGTCTCATATGGTAATGCTGAAGCCCCAGAAATAGAAGAAATAAAGNACAACATTTNCCCCTTTCNTGATGCTTTCAANATAGGGATGTGCAAGTATAGATAAGTGGTAAGCAGCCTCAAAATNTGATGCTCATAATATGAGAGTAATCTTCCATAGTGTAATCTTTAGCTTCCTTGTATATGACTATACCAGCATTATTAACCTAGGAAGAAAAAANATGAAGGAAAGGAATGGTCAAAATGTCACATATTTCTCTAAAAGCAGAGTACATGTTTTGATAACGAGCAATCGCCTCATGTTTGAGNCAATATTTGTACTGATATGTTCTCAATAAAA
SNP_position 1147
sequence_for_GGdesign CAT-TCTTTTTTTTT--NTCAAATTGAAAA-TTTTATCAACGTATAATAAATGGCGAAGC[T/C]TGATTTCAAGGNTGGTCAGTTCAACACTTTAATTTAGTCTCAAAATTATACATACATACA
GGdesign_Final_Score 0.645
Ilmn_Id 16317_1147-0_B_F_1967851014
allele_1 T
allele_2 C
Line allele-1 allele-2
Population Linkage Group Position
LWAE2012 E_11 50.881
DB Program Definition E-Value
EST Name Species Strain