+Marker Data: est_yfr02g22

Crop eggplant
Population AL2010
Linkage Group E_03
Marker Type SNP
Map Position 0.0
Annotation
Source Name YFR02G22
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd tggcagacaaatttattgaggcag
STS_primer_rev tcagaaaaccttgtgagcctttcc
amplicon_seq NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTNCCCCTTCAGGTGATTGTTGAGAGAGCAGAAAAGAGTGATATATCTGAGATTGATAAGAAGAAGTAAGTTGCTTAAGAATCAAGTNGCTCCATTTTGATACATTTGTAACACCACATTTATGTTTCCAAGTTCAACTATATATTGGTTTTNGGCATGAAATTTGCTTTGTAGAATGAGTGTGTGTTATCTCCACTGCTATGTTAGATGTTGCCACACCCATGTCGGATCCTCCAAAAATGTACTATTTGTGAATGCTGCAGCTTTTTGCAGGGGTGGATCCACATGGCGCCTGTCGGGTGCTCAAGCACCCATTGACCCNGAAAAAAGTTGTGTGTATCTATATAGAAAATATGNAGAACTTATATAAATATAAAGATAAGCAGCCATTGGTTCTTGTTGCGCTCCTAAGGCTCAGACCAAGTCCCTAGATGAGGGATCGAATCCCACTGGCAGACACCTGCCAGATGAGCACCCACAATTTTTAAATCTAGAATCTGCCACTGGCTTTTTGTGTTTATTTGTGTGCACATCTTTTAGCACAGGGCTATTATTTATTTGCCTTGCGTTTGTGACATAGGTACCTCGTCCCAGCTGATTTGACTGTTGGACAATTTGTTTACGTGGTTCGAAAGAGGATCAATCTCAGTGCTGAAAAGGCCATATTTGTCTTTGTCAAAAACATTCTACCTCCAACAGGTAAGTACAGTAAGATTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
SNP_position 150
allele_1 C
allele_2 T
ASP_primer_S GCGGGCTCCATTTTGATACATTTGTAACACCAT
ASP_primer_L GCGGGCAGGGCGGCTCCATTTTGATACATTTGTAACACAAC
Common_primer AACCAATATATAGTTGAACTTGGAAACA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 T T
Nakate Shinkuro T T
WCGR112-8 C C

Population Linkage Group Position
AL2010 E_03 0.0
LW2010 E_03 8.2
LWA2010 LWA_03 8.248
LWAE2012 E_03 17.203
LWF2_2022 E_03 8.2

DB Program Definition E-Value

EST Name Species Strain