+Marker Data: est_smfl39e23

Crop eggplant
Population AL2010
Linkage Group E_08
Marker Type SNP
Map Position 76.5
Annotation
Source Name SmFL39E23
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd TGATTTTGGCCCGAAAGTAG
STS_primer_rev AATGCTTGAATCCACTCATGG
amplicon_seq TATTTTGTCTCCCCTGGCATAGCCGGACCACTGATGTATATTACAAACAGATAATGTCATTATCTATGAAGGTAGTGAGGAAAGCTCTTGATTATTTGCTTGCTTTGTCTAGTTATGGCTGAATTTTTGTGTATCTGCTTTGAGATTGATAATGACAGTGAAGAACAGGTCATATATGTGATTGTAATCACTTCATCCATTCATAAATATATATTTAAACTTGCATCCATTATGTCTTCCCCATCTTACTTACTATGGTAACTTCCAAAATTAGTTAAAGGCACCGATAAGAGTCGCCAAATGATTAGAATTGTGTCAGAACCTATGTTGCTCGGACTCTCTAAAAATTGTTGTTGCACCTGTTAGATCCTCTAAAAATGTACTTCTTTCAGAGGATGCGACATGCACCCCGTATATTTTTGAAGAGTTTGAGCAACATAGACTAGAGCAAAATAGGCACTTTAGTAGTGCCTAAAACTTATTCACAATCTATCATCAAGCAGATGGAAGGAAAATACTGATGATATCTATGATAGGGATCATTACTTGAAGGTATCACCTGAGAATGAATTTGTTTTTTTTACTCTCTCCTTTTTTAATTAAATCTTACTTAAATATGAGTTGCCAAATTGGGATGTNNNNNNNNNNNTTAAATATGAGTTGCCAAATTGGGATGTAGATTTAACTACAGAGGAACTGTCAATACATCAATTATTTGATTGATCTCTCGGCTCTACGTGAGAAGTATTCAACAGCAAATGAAAATTTATATCTCAATGGAAGTGTCTTTGATAAGAATAGGGAAATATGTTCCAATAAAAGCTCGGTGATGCATCAAGTAGTTATAGGTGATATCTACTGCAATGTATGAATGTAACAGAAGTTTTCCTTTAATGATTTTTCTGGTCAAACTAAGATCTGAGAAAGCACTGGACTGCACTGAATCTTGGAAAATTGATAATTCTCGTCCTATTGGCTTGCCCTCTCTACTACATGGTCAAATATCATGTTAAGCGATGACATAAAGCAAAATAGAATTTCCAATTTTCTAAATGACGTTAGAACTTTTTGCAACATAATTTTCAGGATTTAAACTAAAGACAATTTTCATAAATAGGGGCTGAAAGGTTCTCTTTGCATGTCACAATATATGCAGATATGTCTCTTCCCATGATATATGGCTACTGGATATTTTTTCTACAAGACAATCCCCAAGAGGGAAGCTAACATTTTCTGGTTTTACTTTCTCAGGGTTACCGTGTAATTCCGTGATAATTCCCCG
SNP_position 131
allele_1 G
allele_2 A
ASP_primer_S GCGGGCAGGGCGGCTGTCATTATCAATCTCAAAGCAGATAC
ASP_primer_L GCGGGCTGTCATTATCAATCTCAAAGCAGATAT
Common_primer TGCTTGCTTTGTCTAGTTATGGCTGAA
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 G G
LS1934 A A
Nakate Shinkuro G G
WCGR112-8 G G

Population Linkage Group Position
AL2010 E_08 76.5
ALF2 AL08 87.7
LW2010 E_08 79.3
LWA2010 LWA_08 77.439
LWAE2012 E_08 75.855
LWF2_2022 E_08 91.4

DB Program Definition E-Value

EST Name Species Strain