+Marker Data: est_sep07e19

Crop eggplant
Population AL2010
Linkage Group E_03
Marker Type SNP
Map Position 56.4
Annotation
Source Name SEP07E19
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd TGGGGTCATGCATAGAGACTTGAA
STS_primer_rev ATCTCCCAGTGGAACATTTGAAGC
amplicon_seq TATCTTATTTGCTATAGAAGAGCATTCTGCTCTCAAGGCCATCGATTTTGGCCTATCCGTCTTTTTCAAGCCTGGTACGACTTCCAATTTCCTTACCCATAACTGAATTAGAAAGACACCCATTTCCTCTGTTTCACAAAAATCTATTCTTTTTTCCTTATGTTTTAAGTGGCAGTTTCATACTCACAAAAGTGTCTGATTCTTAGTAGTAATTTTTGTGATTAATCAGGAGAAAGATTCTCTGAGATTGTGGGAAGTCCATACTACATGGCGCCAGAAGTGTTGAAGCGGAATTATGGACCAGAAGTTGATATTTGGAGTGCTGGTGTCATCCTTTATATTTTGTTATGTGGGGTTCCTCCATTTTGGGCTGGTATATATATTATTTTTCCAGTTTCCTGTTGAGTTCTGATGTTTGCAGTTGTTTGTTGTTCTGGAGTTCAAGTTTTTTTTCCTTAATCTGATTGTCTTCTGCAGAAACTGAACAAGGGGTTGCTCTTGCTATTTTGAGGGGAGTGATCGACTTTAAGAGGGAACCATGGCCTCAAGTCTCTGAAAAGGCAAAGAGTCTTGTCAGACAGATGCTGGAACCTGACCCCAAGAAGCGGTTGACAGCTCAACAGGTCCTTGGTAAGTACTTTTCAACTCAGAGTTTGTGGACTTCCAAGTAAACGGCTCCCCTGGTACATGGAAAACTATATGTTGAACAAAGAAATTCTTGAGATTGATCACCCTTGATTTTCAAGTTGACGGTTGAAGATCCTTGGTATTATTAGATTAGAGAGA
SNP_position 383
allele_1 T
allele_2 G
ASP_primer_S GCGGGCTCCTCCATTTTGGGCTGGTATATATAT
ASP_primer_L GCGGGCAGGGCGGCTCCTCCATTTTGGGCTGGTATATATAG
Common_primer CAACTGCAAACATCAGAACTCAACAGG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 G G
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_03 56.4
LWA2010 LWA_03 83.062
LWAE2012 E_03 88.363

DB Program Definition E-Value

EST Name Species Strain