+Marker Data: est_pst01o14

Crop eggplant
Population AL2010
Linkage Group E_02
Marker Type SNP
Map Position 98.5
Annotation
Source Name PST01O14
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd CAGCTAGGATTGCTTGCTCTTTGC
STS_primer_rev GCAGCGTAATCAATTCCATCCTTC
amplicon_seq TCGGTGCATCAGGAGAACTTCAAATGGTCCCTCAATTCTCATCCAAAGTGTAGGTTAACCGATGTCATCAGCTTGGTCTTTTGGAATTCTGGGGCTGAATTCTTGCTTACACCCTCTGCCTTGACGGTGAATGATGTGGGCTCTAAGCAGAACTTCTTGGCATTGTATTTTCCTGGCTTGAACTCAAAGCCGTCAACACCTCCATCTATGGTAGGACACTGGTTGGCAGTTCCAGTTCCCTTTACTTCCATGTATGTCTTGCTCTGAATCTCGTCATAGGTTAGACGTTTTGGAACTCCTTCAGCATTGGCTCCCTATACGACCAAGTTGCAAGTCTTTAGTAATTTTCTCACTTCAGCACAGGACATCAAAAGAGAAAAAAAAGGACACAAAGCATAAACAGTTGATGGGATCGTTTGGTTGGCAATATGCTATCCCAGGATAATTAATCCCGGGATAAGTTAGCCTGGGATCAGTTATCCCACTATATATAACTTATCCCATCACTAAGGCAAAAATGATGGAATATATGGTCCAATGATTACCTCCAATCAAACATGGATAAAATAATTCTATATTTTGTCCCGGGATTATTATAACTTATGTCTCACACCCAACGACAAAGGACACAAGCTATAGTTCCTGAACTATATAGATGACAAGATGAACATTCCGAAAAACAATATTAAGACATAATTAAGTATGTTCTATCTAACAGTGTAAACTTTTAAATGAGATGGTCGCACAATTTAACAGAAGTATGAAACATTAACTTACTGAGACAACGAGGGCAGAAGTGGCAAGAGCAAATCCAGCAATCTTGGCAGCATCAGTACATTCTGAGCCATCTAT
SNP_position 636
allele_1 A
allele_2 G
ASP_primer_S GCGGGCACACCCAACGACAAAGGACACAAGCTA
ASP_primer_L GCGGGCAGGGCGGCGCACCCAACGACAAAGGACACAAGCTG
Common_primer TTGTTTTTCGGAATGTTCATCTTGTCA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 G G
LS1934 A A
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_02 98.5
ALF2 AL02 103.3
LWA2010 LWA_02 82.617
LWAE2012 E_02 81.041
NAF2 NA02.2 34.9

DB Program Definition E-Value

EST Name Species Strain