+Marker Data: est_pla04p01

Crop eggplant
Population AL2010
Linkage Group E_03
Marker Type SNP
Map Position 26.8
Annotation
Source Name PLA04P01
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd AGCGGATCTTGAAGGAGCTCAAAG
STS_primer_rev AGGATCATCAGGATTAGGGTCCGT
amplicon_seq AAATCTCCTACTTCTTGTAGTGCTGGTAAAACCTAACCCGCTTGCCACATTTTTTTCTGCATTTCGGCTTTTGTGTTAAATTTTGTTTGCTGAATAAATCTTTCGTTTGAATTAGTAGAAGTATGATTGGATCGATTAGGAGATCATTGTTGAGATTTACCTGTAGGACATTTTGATTTCGTGGCCAAACTATTAGCCGTTGGTCTGGAAATTCAAAACATAGTTGCATTTGGTGTTTAAGAGACCACCAATCTGTTAAACCACCAATGTTCACGCATCAAATCATTTAACTTCATGTCTTTTATATGGCTCAACAAAATTCTTACTCACTGTTGCAATCTTTTTAATTCATTACAAAACGAATGTCTTTTTCTTTTTTTAATAACTCTTTAATACCAAATTTTGATGTGAGATTAAAGGACATTTTGATACATTTGATGTATCTTTAATTTAAGACGATAAGATTCAGAAGTTCTTTTTGTTTCTTTTACTGTGTGTCGGTCAAAATGGGACAAAAAATTTGAACGCTAGGGAGTAAATTTTTGCATCAATGTTTTGTTTTTGGCTCAAGTCTGGCTTAATAGTTTGATTTTCTTAGCCATAAACATGTCAATGGCTGAAGATTCTGCCCCTCAATGGAAATTCTGATTTATGTTCTGATTTTTATCATCTGTATGACTGGCATTGTTTAGTAGGCTTGGGTGTGACATAATTTAATTGGATATCAAAGGGTACATGAAAGTTTACAGAGAGATGCGGTGCTAGAAT
SNP_position 370
allele_1 T
allele_2 C
ASP_primer_S GCGGGCTTAATTCATTACAAAACGAATGTCTTT
ASP_primer_L GCGGGCAGGGCGGCTTAATTCATTACAAAACGAATGTCTTC
Common_primer TCTCACATCAAAATTTGGTATTAAAGAGT
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 T T
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_03 26.8
LWA2010 LWA_03 53.187
LWAE2012 E_03 64.611

DB Program Definition E-Value

EST Name Species Strain