+Marker Data: est_per08h21

Crop eggplant
Population AL2010
Linkage Group E_11
Marker Type SNP
Map Position 33.7
Annotation
Source Name PER08H21
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd CAACTCGTAGAGCAACTGGTCGTT
STS_primer_rev AGTAATCCGATTGTTGTGGCATTC
amplicon_seq GTCAAATTCCTGACATTATCAGTTGAGTCCATTTGGCTATTTTTTAAATTGTTAGTTTTTAAATAATGTTTTCGTCATATGATTTATAAGTCACAGGGATCAATAAGGGTTGTGGTAGAGTGATAAGTACTCCTTCACTCTTAACCAGAGATTTTGAGTTTGAGTCACCTTGGGTACGGAGTCACCCTTGTTAGGGAGCGCTTTACCTCCTACGACGGGACTTTTAAACTGATGCTTGCATCAGGATAGAGTGTCTACATCACATCTTTATTAGAGAGTGGTGGTCCTTCTGTGGCTCTGTGTGAATGCGAGATGTTCTATATGTAATTAGAGTAAGGCAGGGGCGGATCTAGGATTATCATATATATCGAGTTCATTTGAATCTAGTATTTTCGATGCAAAGTATGAATTTATGTGTTAAACTTTATTAAAACTATATGACACATAGTAGATATATGAATCGTAACTTTAAAAATATAAATAAATCAATGTGAAGAACCTTAAAGATTAAACTCATAGAGTGTTGGTTTTTTTCTAGACTCTGTGTGAATGTGAAATGTTATGTATGTAATTAGTGTTAGGCAGGGGCGGATCCACAATTAAGGCATCGAGTTCATTCGAATCTAGTATTTTCAATGCATAGCATGAATTTGTGCGTAAAAATTTATTAAAACTATAACACATAGTAGATATATGAACCATAACTTTAAAAAAATAAATTAATGTGAAGAACCTTAAAAGTT
SNP_position 376
allele_1 A
allele_2 G
ASP_primer_S GCGGGCTTTGCATCGAAAATACTAGATTCAAAT
ASP_primer_L GCGGGCAGGGCGGCTTTGCATCGAAAATACTAGATTCACAC
Common_primer AATTAGAGTAAGGCAGGGGCGGATCTA
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 G G
LS1934 A A
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_11 33.7
ALF2 AL11 40.9
LWA2010 LWA_11 34.173
LWAE2012 E_11 39.304

DB Program Definition E-Value

EST Name Species Strain