+Marker Data: est_cal05h22

Crop eggplant
Population AL2010
Linkage Group E_07
Marker Type SNP
Map Position 62.3
Annotation
Source Name CAL05H22
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd ATATTTGGAGCGCAGGTGTTATGC
STS_primer_rev TCGATTGAGCCATTTCCATCTACA
amplicon_seq CTTTTAAAGGAACGAGATATTATTGGGGCACATCAATTTAGTAATTCTACGAAGGAAAGAAACGGTTAATAACTTTTATTCTGACTTACAGCTTCCATCAATTGCTTGACTTCAGCCTCGGTGAGCTTTGACCCAAGTTTAGCCAATCCACTCTTCAGTTCTTCATAAGTGATAGTGCCACTATTATCAGTGTCAATATTGTGGAACATTGCTTTGAGCCCGTGAATTTCTTCTGCAGAGAGATTCTCGGCAATGATCTGATTCCAGTGACAGACAATGCAATGCGTTATTACTTGCAGAAGGAAGAACAAGGCAGCTAAAATGCAAGCACAGAATAGAGTTAAATGTCGAAAGTCAATCAGGAGGTGTACTATGTTTATCATACAACTATGAGTAAGCAAGAAAGTCGACTTGTCAAATTCCCCAAAAAATATGGTTGAATAATGCTAAATCTAATTATGTTCTTCACATGTTGTTTGCTCGAAAGAAATGGAAGGAAGAGACATTAAAGCAGATAAAAGTGAAAACAGTAATTTTCTTGCATGTGAAGTACATGACTATCATATGAGAAACTCCATACATGCAAAAGGCAGTCCTTTTGTCTTCTTTAGACAAACAAGCCAACATAAAATCGAAATATACCCTTATACACCCTTTTCCCTTTACCTAGATTCAGTTGCAGCAGAAATGACAAAATTACCTTCAAAGCGAGTTTCTTGAGCTTGTTCATAGCTCTGAATTGCTTCATTCTTGATAGGACAGCACCCTCTAA
SNP_position 285
allele_1 C
allele_2 T
ASP_primer_S GCGGGCGATTCCAGTGACAGACAATGCAATGT
ASP_primer_L GCGGGCAGGGCGGCGATTCCAGTGACAGACAATGCAATGC
Common_primer TGTGCTTGCATTTTAGCTGCCTTGTT
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 T T
WCGR112-8 C C

Population Linkage Group Position
AL2010 E_07 62.3
ALF2 AL07 75.6
LW2010 E_07 90.0
LWA2010 LWA_07 87.701
LWAE2012 E_07 85.019
LWF2_2022 E_07 98.1
NAF2 NA07 100.9

DB Program Definition E-Value

EST Name Species Strain