+Marker Data: est_cal01g03

Crop eggplant
Population AL2010
Linkage Group E_02
Marker Type SNP
Map Position 71.9
Annotation
Source Name CAL01G03
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd ATTTGGTGGAAATGCTCATCCGCT
STS_primer_rev GGTTGTTGATCGATGAATCTGG
amplicon_seq AATGGAACACCTCAGCTCTTCACAGCTGCAATATCAAATGAACAATGTAAAACACCACAAGTTAATAAAACAGGTTATCTCCTATGTCACATTGACTCAGGCATAAATGCTGGCCGTTAAGTACCTTGGTACAGGTGTAATTAGGGGTACGTCAAGTTGAAGTGTCTAACATATCTTGAAAGATATACCACGTCACATTTATTTATCTCACATACTTCAGGACAAATGAATACTCCATGTCACATAGTAATCTCAAATACAACACTTAAAAACATGAGTCTAGAAACATTAGCTGGGATGATTTTGGCTGGGGCATAAAATGGCTATCTCCTATGTCACATAGACTCATTTATGGATGCCTGTATGTAACCTTTACAGATATTGATACAGGTAAGTCAACTTCTTCTGCATCTTGTGAGATTGATTTGAAATACTGATCCTCATTTAACACAAGTACATTGAGGCAAATGAATACTCCACGTTACATCTCCAAATAGTAAAGTCAAAAAAGAGTCTTGAAAGCGAGGATGATTCAGCAAAAGTATATGATACAAGGCTTACTTTATATGAAAACAACTGGAAGTAAAAACCACCTAATTGATTTCACAGTATGTCAATGTTTAGGTGTAAGGTTCAAATACAAAAATAGTAGGTGATTTCTTCCCTTGTAGACACTTGGTAAGTAGTACTTAACAAATATAAAAGCAAAACACCCATATTGAAGAATAAAAAAAGTTGTGATTTTTTGTTCAAGAAAATACCTTTGAACACTTGGGACTTGTTGAGAAGATCCATGGATAGATATAGAGCCCGGCCTGATTGTAGGGCTTTTCCAAGAGTACCGTTTTCCTCATGAGGCTCAAGTTTAATGCAGGACCCAAATCAGCAATGCCGACATGAC
SNP_position 343
allele_1 G
allele_2 A
ASP_primer_S GCGGGCTTACATACAGGCATCCATAAATGAGTT
ASP_primer_L GCGGGCAGGGCGGCTTACATACAGGCATCCATAAATGAGTC
Common_primer GCTGGGGCATAAAATGGCTATCTCCTA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 G G
LS1934 A A
WCGR112-8 G G

Population Linkage Group Position
AL2010 E_02 71.9
LW2010 E_02 50.8
LWA2010 LWA_02 54.303
LWAE2012 E_02 54.458
LWF2_2022 E_02 81.2

DB Program Definition E-Value

EST Name Species Strain