+Marker Data: est_ae002c05

Crop eggplant
Population AL2010
Linkage Group E_07
Marker Type SNP
Map Position 8.7
Annotation
Source Name AE002C05
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd CGTGTGAGCTTGTTCCAAGAGAAA
STS_primer_rev GATCAGGCAATGAATGCTCGATAA
amplicon_seq TCGTGTGAGGCTTGTTCCAAGAGAAACTGCAGGAATTGATGGACTTGAATAAAGGTAAAATTTGAATCTTTCTTTAAAGTTTTGGGTGGTAATAGAATAGATAAAGAAGTTGTGCCCGGAAGGCTAGAGTGTCCACTTCTGATACTATTGTTTCTGATAAGTAAAAAAGAGAAAAGTATCATATTTGCCTCCTGTAACATGCTGGTCACTTCTCATTGTTCATATCGATTTTGAAGAATAGGTATTGTAGACTTGTAGTAGAGATTGAAATGATTTATGTTTGTTCTGCGTATTATAGTTATTTTGTTGAAGATGTGCTATTTTGAAAGCTTGATTTGTTTCTATATGACATATTAATGACAAAATGTTGAATGCTGACTATTCTCAATTTGTCCTTAAGCGCCATTGCGACCATCAGCTAGGATAAATCCGCAAGGTGCAGCTCGATTTATCGAGCATTCTTGGCCTGGGATCA
SNP_position 324
allele_1 T
allele_2 A
ASP_primer_S GCGGGCGTTATTTTGTTGAAGATGTGCTATTTA
ASP_primer_L GCGGGCAGGGCGGCGTTATTTTGTTGAAGATGTGCTATTTT
Common_primer TCAGCATTCAACATTTTGTCATTAATATG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 A A
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_07 8.7
ALF2 AL07 17.9
LW2010 E_07 32.3
LWA2010 LWA_07 32.58
LWAE2012 E_07 33.901
LWF2_2022 E_07 34.1

DB Program Definition E-Value

EST Name Species Strain