+Marker Data: SOL8443

Crop eggplant
Population AL2010
Linkage Group E_04
Marker Type SNP
Map Position 34.4
Annotation
Source Name OVL04F21C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd agcagaagcgtctccaattactcg
STS_primer_rev agatagagcaggcactgtcaaggc
amplicon_seq NNNAATATGAGTAAGTCCTTGCATCTTTTTCTTTTTCCAATGCTAAAAAAGGGTTCTTAGGAGTAAGACAGATTTTTCATGTATAATAATGTGTTTGTGATGAGAATGATCCCACATTCAGACCATGAGGAGATACCTGAACTCCTTATAAGGCTTAGGTAATCCTCCAACGCTTTAGCTAGCTTTTCGGGTAGAAGTTAGGCCCAAGGCCTAATCTGACATGCTATTTNTTATACGCTTCACTTTCTTTGAGTCTCTGATCCTGCAATTTCTGCTCCAAAAACTTCACATTCATGCTTCGTCTTAGGTGCATAAGCTAATTGCTACCAATCCCCCCAAAAGGAGGGGAATGGGCGCGTAGAGAGTGAGCATAGATTATTTTGATCCTTCTTCTTGGTTGATTCTTGCAGTGTTCCTGAAGTGNNNNNNNNNNNNN
SNP_position 194
allele_1 G
allele_2 A
ASP_primer_S GCGGGCTCAGATTAGGCCTTGGGCCTAACTTT
ASP_primer_L GCGGGCAGGGCGGCTCAGATTAGGCCTTGGGCCTAACATC
Common_primer CTCCAACGCTTTAGCTAGCTTTTCGG
enzyme
dye

Line allele-1 allele-2
AE-P03 A A
LS1934 A A
Nakate Shinkuro A A
WCGR112-8 G G

Population Linkage Group Position
AL2010 E_04 34.4
ALF2 AL04 79.8
LW2010 E_04 65.9
LWA2010 LWA_04 68.035
LWAE2012 E_04 67.247
LWF2_2022 E_04 87.9
NAF2 NA04 83.9

DB Program Definition E-Value

EST Name Species Strain