+Marker Data: SOL8400

Crop eggplant
Population AL2010
Linkage Group E_07
Marker Type SNP
Map Position 57.8
Annotation
Source Name OVL04B13A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd aatattcaacgcctcctcaccaaa
STS_primer_rev gaagccagagtaatcctgagagca
amplicon_seq TNNNNNNACTCCTTCCATTTGAGTTGAAACTTGAACGCTTTCGTTTTTGCTTCTGTGAATTTACCTTCTTGTTTAGTATTTAAATTTGCAAGTAAAAAGCAAAATTGGTTGCTTTGAATTTCAAGTTTTTAATAAGGGTTTTAGCTATACTTGTGGAATGTTTGTCCAGAATATGGGGTTCCGGAATATGAGGTAAAGGTTGAANTTTTTGAGGGAATCAAGAGATTAGTTTTAAGAAAGCACAAATTTTTATTGTAAAAATAAAGGAATGGGAAAAAGCTCATGTGATTTGAGCTCGTCTGTGTCGTGCGATGACTCATCGCACCAGGCNNNNNNNNNGTGGATTACCTTTCCTATGTGGTTTCCTNNNNNNTGCATAAGAGTTTACTCTGTGNGCGCCCTATGAGTTCCTCTTGTTATTAAAAAAAAAAAAAAAAAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATATGGCTTGAATGTTAAAGCTTTCAAATACAACAGTCACATAATCTACCTGCCTTAAGGCTTTAACATTTCCCAAAGTTTCACTCCCCCAAACACAAACTCTCAGTTCTGTAGCTACAAAGCTTCACTTTTACACAAATGATTAAAACTNTGTCCTCAATCATTTGGCACAAATGTATCTTAAGAGAACTGNTTTGCTTCATAAAACTGTTGTGCTTGGCTCCACAGCTGAAAAATGAGAAAGTGGTATTCGTTTGTCTCATGATTTAAGATTGTTTGATATCTATAGTATCTCCACATATGCTTCATAAGCAACGTGGACCAAGTTATCTCTTATTTCTGAGTATGAAATGAATTAAAATACCAGCAAAGATAGTCCCTTATCCTCTGCTTGCAAAAGACAAAAAAATAGTCTCTTTATCCTCTGTTAAGGGGAAGAAATCCGCNAACTAATTTCTGATTTATATANNNN
SNP_position 285
allele_1 G
allele_2 T
ASP_primer_S GCGGGCAAAGGAATGGGAAAAAGCTCATT
ASP_primer_L GCGGGCAGGGCGGCAAAGGAATGGGAAAAAGCTCTTG
Common_primer GAGTCATCGCACGACACAGACGA
enzyme Native Taq
dye SYBR Green I
Line allele-1 allele-2
AE-P03 T T
WCGR112-8 G G
Population Linkage Group Position
AL2010 E_07 57.8
LWA2010 LWA_07 81.243
LWAE2012 E_07 77.127
DB Program Definition E-Value
EST Name Species Strain