+Marker Data: SOL8355

Crop eggplant
Population AL2010
Linkage Group E_02
Marker Type SNP
Map Position 83.7
Annotation
Source Name MLF02J23F
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd tggagttgatatttggacttcccac
STS_primer_rev tacgagctccaagcactgaattgt
amplicon_seq NNNCCTTTANNNNNNNNNNNNNNNTATTATTTGACCTCTCANGACCTGCCATACCTTTTAATCTTATTTTTGAACTGTAAATTGGNACTATTACTACTTTATTTAGTTATTTAACACAAAGATATATGTATTATTTGATTTAAATGAAATATACTGGAAGTGTAATTTTGGGGATTTGTNAGTGAAAACTGGCAGCAGAAACCGAAGGTTGAAGTGGTCCTGACTCTTAAAAAATATCAAGATGACCTGTTTAAAAGGGGAAAGCAAGAATATAACTGCCAGTGGTCATATGATATTGAAGGATTTAAATTCTATAAGGTGTCAACATACGTATAATGACAGTGTAAAGATTTTGTTTCTATCTTTCTTTTTTTTTTTTTTTGAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACTGTTAATTATAAAAATAATACAACTTATCATAGAAATTACTTGTAATTATCTTATAGTATATGACCTTTGTAGATTCGTTTTGATATCATCAGTAAAAAATAGCCAAACTATCCTGCTAATTAACTCCAAGTTGAACTATATTGAAATATTTTTTATACTAATTATGAAAGGTAAGAAGAAAGTCACTTTGAAATAGATAGAAGAATGAATATTTAATTTAAATTACATGGACCCTAGGCAGGTCAAGAGAGGCCTTGGCGTTTTGCATGATAATGGATACAAATGAAGAAAGAGAGAGGTAGAAAAAATATTCAACAATTAAACATAATGTCCCAGAAAGAAATCAACAATATTAAAGATACTTAGAAAGAGAAAATAATGTCACCCCTAGTNAGCATTGGTCAGGCACGATTATGTTTTAATGAAAGAGCGCTGGACACATTAATTAATAGTTTTAAGTCGTAAAAATAATAATTAATAATAGTATTGTCACCCTCATAGGCAGCAAAAGGAACTACATCCTCCAATTAACAAACCTCCGTACAGCCTTGTCGTTTTATGTGTCCAAGTTAATCCCCTCGCACCTTCTTGGTGGGTGGTGCATCACATGCCTTTCTTTCTNNNNCACGCCGTTACCTTCCTCAGCATTTGAATCGAATCTTATACNAATTGACACCTACTACATTTTATGTAGATATTATTAAATAATTTGTTGGAACTGAGACGACCTGTAATTNNNNNNNNNNNN
SNP_position 242
allele_1 A
allele_2 C
ASP_primer_S GCGGGCTTGCTTTCCCCTTTTAAACAGGTCAT
ASP_primer_L GCGGGCAGGGCGGCTTGCTTTCCCCTTTTAAACAGGTCAG
Common_primer AACCGAAGGTTGAAGTGGTCCTGACT
enzyme Native Taq
dye SYBR Green I
Line allele-1 allele-2
AE-P03 C C
LS1934 A A
Nakate Shinkuro C C
WCGR112-8 C C
Population Linkage Group Position
AL2010 E_02 83.7
LW2010 E_02 63.6
LWA2010 LWA_02 66.573
LWAE2012 E_02 66.148
LWF2_2022 E_02 93.1
DB Program Definition E-Value
EST Name Species Strain