+Marker Data: SOL8346

Crop eggplant
Population AL2010
Linkage Group E_03
Marker Type SNP
Map Position 38.9
Annotation
Source Name SmFL04F16F
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd gtgaaggcgcaagaacaaactgt
STS_primer_rev gttggatctctgctggatggtctt
amplicon_seq CTTAATTGCATGCTCTGCAGCTTCTTCAACTATCNGGATCATGCACAGGCACTGATTTCAATCCAGAGGTTTGCTCTTCTAAATAATTGAAAAGAAAAAGACCATCACCAACAATATTTATTTCCAAGAGAATCAAATATCTAGATGGTACTTTACAGGGATATGAATAGAGTTGATCCTATTCACTCTTTATGATAGAACATTCTCCACTGGAAGAACTAGGCAAAACTACTTTCAACTCAGAAGAAGACAGAATACCAGAAAAAGGTCCTATAACAGATTAACTAAGACAAGCCACAGGCACATAACGCAGAGAAATGATGCAGAGACATACCCCTCTATAATTACAACGTCAACCCAAAGCTATATTATCTGACCACTTCCTCACAAGAACATTGTTCATTACAGTGGAAGCGTCATATTCAGTTTGATTCATGCAAACCCCAAGCTGTTGATAAGATAGAATAGAACACCACTAATTAACATTATTAACATCAATAAGAGTGCTACCTTGCTTAACTCCTAGATCTGAAGAAGTAAACGTGGGACCATCTTCAACATGCTTGAACTCTTGAAGTTCCTTAAAATTCAACCACGGTTTCACCCAGACCTTAGCCTCATAGAATTTCTTTTTTTCCAGCATCTATAACCTCCAGAGTGAGATGGTGCAGTTTACCAGCAACN
SNP_position 462
allele_1 A
allele_2 T
ASP_primer_S GCGGGCTTAATTAGTGGTGTTCTATTCT
ASP_primer_L GCGGGCAGGGCGGCTTAATTAGTGGTGTTCTATTCA
Common_primer TTGATTCATGCAAACCCCAAGC
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 A A
LS1934 T T
Nakate Shinkuro A A
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_03 38.9
ALF2 AL03 34.8
LWA2010 LWA_03 65.77
LWAE2012 E_03 73.353

DB Program Definition E-Value

EST Name Species Strain