+Marker Data: SOL8291

Crop eggplant
Population AL2010
Linkage Group E_11
Marker Type SNP
Map Position 9.6
Annotation
Source Name LS504A03A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd tcctaacagcaaggaggaaggatg
STS_primer_rev atcttcaaaggtcttggacgctca
amplicon_seq NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGANNNNNNNNNNCAAGGATATGGTTAAGTTCAAGGTTCGCTGCTCCAAGTACCTGTACACACTCTGTGTGTCTGACTTTGAGAAGGCGGACAAGCTGAAGCAGTCACTCCCCCCAGGTATGCTTATCTACACTTTCAATACGTTGTTCCAGTTGGCTAGTTTATTTGCNGTATTGCTGCTAATCATCGATGATCACGAATCTCATTGTAGGTTTGAGCGTCCAAGACCTTTGAAGANNNN
SNP_position 197
allele_1 T
allele_2 C
ASP_primer_S GCGGGCCCCCCCAGGTATGCTTATCTACACTTT
ASP_primer_L GCGGGCAGGGCGGCCCCCCCAGGTATGCTTATCTACACTTC
Common_primer GCAAATAAACTAGCCAACTGGAACAACG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 T T
Nakate Shinkuro C C
WCGR112-8 C C

Population Linkage Group Position
AL2010 E_11 9.6
ALF2 AL11 15.1
LW2010 E_11 12.4
LWA2010 LWA_11 11.58
LWAE2012 E_11 18.056
LWF2_2022 E_11 15.4

DB Program Definition E-Value

EST Name Species Strain