+Marker Data: SOL8208

Crop eggplant
Population AL2010
Linkage Group E_03
Marker Type SNP
Map Position 10.1
Annotation
Source Name CHX04M24F
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd AGTTCGACAAACCGGAAAACTTTG
STS_primer_rev AAGCAGGGAAGCACCACAGTTAAG
amplicon_seq CCGTTGATCAACGGATATTTATGTTGCTGATGTGAAGAACATGCATGCAATTAGAAAGATTAGCAAGTCAGGTATCTAGATATAGTTGTGATATTTTCTTATTTTGTGTGGTCTTATTGGCTGTCTTTGATCTGACTTAAAAAGTGTTTTCTGTTTGAAATGTTGTGCTAGAAATTCATAACAAGGTTTTGGTTGGGGTGTAAAGTTGGAGCCAAGGCCTGGTTTATAGTGATACTTGGGGACTGTGAAAATAACTTTGACATGTTAAGAGGAGCTAGTAAAAAATGTCATTCAAGTAAAAAATTTAGAAATAGCATCCACTGGCGGCTTTTCGTTCTTATAACTGGAAAATAGTCACTGTCTTGGAGTTCCAGGCGGAAAAACGTAGAAATATAGCGCTGACTGGCCACTTTTTGATCGTGTAATTGGAAAATAGTCATTATCATGGGGTTCCAGGAGGAAAAATGTAGAAATAGCGAGTGGCCACTTTTCAATCTTGTAATTGAAAAATAGTCACGGTCAGGAGTATCAAATTCAACAGGGAGTTTCACCCGTGGAATTTGAGCTCCATGATAGTGTCTATTTTTCAATTACACTGGCTGAAAAATGGTTATTTGTAAATTTTATATGCTCTTAAGTTGTTTTCCCATTTCACTTTTAAGATTTATTTTAGATGATATGGCAAACTCCACCACCATATCAGAGAGCCTACCTTGGGGCCTTTTCTTGCTTTCGTCTGTTTGGGATTCAAATGTCAACGTTATGGTTTGATGTGGAAGGTCTTTACCGCTAAGCTATCCCTTGTCAAGGACATCATTTTTATGTTTTTAGAAATTGAGTGGCTGTCAGATTCTGGGTTAATGTTTGATGAATGTTAAGAATAGCACTAATTAGAANGGAGGATTTTGTCAGANCAATGGGGAAAANTAAGAGAGANCACCGAGCTTCATGGATGAGTANGTGGAAATGCAGCATTCTAATGTGAGTATNNTACTNNNNAACCGGGCTTTTTCNATTCANTGCAGCTTTCANTGNATNGACCGNATAGCTGCTTNCANGCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGAGTGTTCTCNTCATGGAAGGTGGTCTAGCGTGTTTACNTTGCTTTGGGAAAAGNACCNAAATTACCTTNCAACTATACAAAAATTTTCAATTTTTCCCTCTACNTTTGTTTGAAGCCATTCGTACCTTGTCCTTAGCAAATCATTTTGTATTTGCGCTTAACTTTTTACAGAGGTCCAAGATGGTCTGAGTGGATTCCTCGTGTCGAAATACTTGAGCAAAAGAGGTTCAGCCCTCTACTTTTGAATATGGTTTCATAGATTATCCTCTATTGTACTTCACGTTGGAGCTCCCTTAGAGTCCAGGAAAATAAGAGATGATTTGCAAATGGCATGGGTATATGAATGGCAAAGTATACTGAAGGATCAAATTATAGTAGAGGGGGATTCTTTGATCCTTTCCCTTTTGCTTATTTACCCAGGTAGTTGCCAAATGGTGGTGTTATTATATGGTAACTGTAGTTTATGCTGCTTAATTAATATTTGTTTTATTACTATTGTCGTGTTGGATTCTGAATGCAACTCCTCAATCAATGATGATATCAGGTGTTACTACAATAGCAGGAGGTTATTCAAAATCAGCTGGCCATACTGATGGACCTGGATTAAATGCCTCATTCTCAAATCGTTATGAGCTTTCTTTTGTTCCTAAAAGATGCACTCTAATGATCTCTGACAATGGCAATAGTTTAGTCCGTAAAATACAGCTTAAAGCCGAGGATTGTTCAAGAGATTCTCATTCTGGTAATACATTAATCCAAGCATACATTACTCGTTCTTTTATTGTGTTTGTTCCCTTGTTGTGATTTTGAGGTTGGAATTGCTCATCAGTTTCTGCAGTCTAAAAGCTTGTGGATTGTTTAGTACACAACATTACAACAAATATTAAATTTCCATGAACCTTTTGAAATCTCATCTCTTAGATTTTTCTCGCTTTGTGTTTCTGAATGCCAGTCTTTCGCTTGTATTTGAAATCAGATACTTTTGACATTTCTAAAANCTTCTCAGGTCTAAGAGCAN
SNP_position 1541
allele_1 C
allele_2 T
ASP_primer_S GCGGGCAACACCACCATTTGGCAACTACCTA
ASP_primer_L GCGGGCAGGGCGGCAACACCACCATTTGGCAACTACATG
Common_primer GGGGGATTCTTTGATCCTTTCCCTT
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 C C
Nakate Shinkuro T T
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_03 10.1
LW2010 E_03 36.9
LWA2010 LWA_03 37.078
LWAE2012 E_03 44.362
LWF2_2022 E_03 39.7

DB Program Definition E-Value

EST Name Species Strain