+Marker Data: SOL8169

Crop eggplant
Population AL2010
Linkage Group E_03
Marker Type SNP
Map Position 9.0
Annotation
Source Name PLA02N11C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd cttcaccttggggtaaacagtgga
STS_primer_rev agttgatgcaatagcctccagcag
amplicon_seq NNNNNNNNNNNNNNNNNNNGCAATTGAGAGGCTGGCAGTAAATGAAGCCACATTTCGTTGTGCAGATGAACTTGGTTGGCAACCTCAGGTAAGGTGTTTCATTTCTTGACCGAGATGACCCAACCTGATATTTCGTTATGCTAATATTCTTATTGACTTTCCACAGCGATTGCCTATTGTACCAGAAGATGGAGGAATAAATCGAACAAGAAAGGTCTTTTCTATTTTTCATATCATACTTAATCTGCTAAAGTGCTTTTTTTTTTGTTTTGTTATCAGCTTCCCCGTTCCCGGTAAGTTCTTTGCATGTATTCGCTCCATTTTCCTTGTGTCCTAATCTATTACTTTTTTGATGGTTGAAGACGTCTTGCTCTACTGAGTCAATCCTGGAGTTCTTAAAGAAGAAAGGGTTTGAAGTGACAATGTCCGACGATGCAGGTCGTTTTGTGTGCAATTATGTGTACTACCATTCTCTCCGATTCGCAGAGGAAAAAGGTCACAAGTCTCTGTTTGTCCATGTGCCTACCTTTAATAGAGTGAGTCAAGAGAAACAAATGGAATTTATAGCTGCTCTNNNNNNNNN
SNP_position 137
allele_1 T
allele_2 G
ASP_primer_S GCGGGCCGAGATGACCCAACCTGATATTTCGTT
ASP_primer_L GCGGGCAGGGCGGCCGAGATGACCCAACCTGATATTTCATG
Common_primer AGGCAATCGCTGTGGAAAGTCAATAAG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 G G
LS1934 T T
Nakate Shinkuro G G
WCGR112-8 G G

Population Linkage Group Position
AL2010 E_03 9.0
LW2010 E_03 35.6
LWA2010 LWA_03 35.941
LWAE2012 E_03 45.272
LWF2_2022 E_03 34.0

DB Program Definition E-Value

EST Name Species Strain