+Marker Data: SOL8148

Crop eggplant
Population AL2010
Linkage Group E_07
Marker Type SNP
Map Position 0.0
Annotation
Source Name SHT04O16C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd tgaagatattccgagggctcttttagc
STS_primer_rev gattcttcaagttcacgaaaacctcg
amplicon_seq CTCTTTTAGCTGCTTGCAAGGGTGCAGTAGAGCCTGTATTAAATGCTTATGACCAGTTGTTATCCAGTGGAGCAGTGTTGCCAATTCCGAATCTTAGATTGCGTCTCCTGCGTTCCGTGCTGGCTTTACTTCGTGAATGGGCACTTTCCGTCTTCGCACAGGGAATGAGTACAAGTGTTACTGGAGCCTCTCTAATTCTTGGTGGAACTGTATCATTAGGACAGACTGCAGTTGTTAATCAAGGTGTTCGTGATAAAATAACAAGTGCAGCGAATAGGTTAGTTTCCGTTCAGAGGTTACTAATATATGTCTTTCCACTCATTTCAACAGTATCTAGTTAGGCTTCTCGACTCTTGTTATCTTCTGCATGTTATGGTTCTACCGAATTGGTATAGCATAAAATTTATAAATGTTTTACGCTGCACTGGTCTTTTAAAATTAATCTATGATTCACATGTGCCTACAGTGTGTTATGATGGAGCTGAATCTCTTTTGTTTGTTCGTAAGATTTGCATACTTGTCTCATTTCGTCGTTACATATGTGCATATCTTAATCTGTTGATGTTTCTTGTTTTCCCTGTTTAAGCAGATATATGACAGAAGTGCGAAGACTACCTCTTCCACAAAATCAGACTGAAGCTGTCTATCGAGGTTT
SNP_position 447
allele_1 T
allele_2 C
ASP_primer_S GCGGGCGTAGGCACATGTGAATCA
ASP_primer_L GCGGGCAGGGCGGCGTAGGCACATGTGAATCG
Common_primer ATGTTTTACGCTGCACTGGTCT
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 C C
LS1934 T T
Nakate Shinkuro T T
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_07 0.0
ALF2 AL07 0.0
LWA2010 LWA_07 21.956
LWAE2012 E_07 21.317
NAF2 NA07 24.1

DB Program Definition E-Value

EST Name Species Strain