Typing_Method |
Tm-Shift
|
Marker_Class |
SOL
|
STS_primer_fwd |
AAGGAAGCTGGGCTTTCAAGACTC
|
STS_primer_rev |
TCAGAACCAATCTCACCAGACCAC
|
amplicon_seq |
NNNNNNNNNNNNNNNNNNAATGTGCTGCAGATAAATGTTTTCTTGAGAATAACAGGCAAGAGGGATGACGGGTATCATGATTTGGCATCTCTCTTTCATGTAAGTGTTCAACTTCCTTTTTTGTGCTTGAGATTTTGTGTGGTGAGAAATCAGATTATGGTAATGCTTGAAAGAATCCCATTGGAATTATGCTATGCTATCACCCCCTCCGTTTCAATTTGTTTGTCTAGTTTTGACTTGACATAGAGTTTAACAAAGTAAAAAGGACTTTTGAATCACGTGCCTGAAACTAAAGATAAGTAGAATGTACTGAAATGTCTTTTAATCTTGTGGTCTTAAACATGCAATAGAAAGTAAGAATTAAAGAGTTTCATAAAAGGGAAGAAACATTCTTTTTTAACGAACTTGAAAGGAAAGTAAGACAAACAAACTGAAACAAACGGAGTATAATGCAAGTTCTGAAGAATTGCAAGCTCCTGTTATTATCGTTTTTATTAATGAAGTTCTGGAAGAATGAATGATCAAGTGTGTTAGAAGTTTTGAAATGACGAGCCTTTTTTTCTTTCCTTCAGGTAATTAGTCTAGGAGATAAAATAAAGTTTTCGCTCTCACCATCGAAGTCAAAGGATCGTTTATCTACTAATGTTGCTGGAGTTCCACTCGATGAGAGAAATCTGGTAAAGGAAGAAGCTGATATGGGTATCCTCATACTCATCAATTTTAATGATCTGATTAGTATATTCATGATTTTGCCACTCTATTTGCAGATTATAAAGGCCCTCAATCTTTATAGGAAAAAGACTGGAACTGACAATTACTTTTGGGTAAATCTTTAAACTGTTAGCAAAGTAATGAGTTTGGAATAACTTTTGGGTATATTGTGACCTCTTTAACTTTATTACCTGTTTCTCCGGCCAGATTCATCTTGATAAGAACGTGCCAACTGGAGCTGGTCTTGNN
|
SNP_position |
335
|
allele_1 |
C
|
allele_2 |
T
|
ASP_primer_S |
GCGGGCACTGAAATGTCTTTTAATCTTGTGGTT
|
ASP_primer_L |
GCGGGCAGGGCGGCACTGAAATGTCTTTTAATCTTGTGTTC
|
Common_primer |
TCTTCCCTTTTATGAAACTCTTTAATTC
|
enzyme |
Native Taq
|
dye |
SYBR Green I
|