+Marker Data: SOL7208

Crop eggplant
Population AL2010
Linkage Group E_04
Marker Type SNP
Map Position 13.5
Annotation
Source Name AE501P23A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TCCTAAATGTGTTCGAGTGATGGG
STS_primer_rev ATTCAAGTATGTCGCCCACGATTT
amplicon_seq NNNATGGGCGGGCTGAATGACAAGGAGATTAATCAGACCTATGTGAAGGTAGTAAAAATCAGGACCTTAAAATTACATTTGTGCTGTCAAAAAGCTTTCTAAGTTCTATTTATTGTTATAGTTGAATAATTAAGATATTTTGCTTGGATTTAGAACTTACTGAAACGTCACTGTATCCATTTCCTCTCATATACGTTTTCCTTTATGTATGATTCTCTCTCTCTCTCTCTCTCTCAACCTTTTGCTTGCAGGTGCTAAGTCAAATGCCATATTTCAGGTTATCCGGTGGCCGCAACCACATATTTGTCTTCCCAAGGTATAAGTAGTCATACGGTGATCCTTAAACTCATGAATAGGAATCCAATTATGAGATTCTTGCTTCACAGATTATAGATGACCCAATGATGTATGGAGGTTTTAAAAGCTGGTATATGAAAACAACAGGATAGCTAAGTTCTGCATGGCTTGGATGTAGATATAAAGCCACACCCTCAAAGTTGCTATCCGATAAAAATATCGCCTAATTGTAGTTGTGCTGCATTTGTCAAAACTGCCATTTAATAAGACAGGAGTAACCACGTTATGAACTGGGATGTAGATGTAAAGCCAGAACTTCAACGTTGCTGTCAGATAAAATATTGATCATCCATTTTTACCTGTGCTAAATGCTGTTGCAAATAGACATGCTGCTAAATTTCTTTTAGTAGCATTTTCAATTGAAAGAATTAATACTTTTTCTTATGTGTGTTACTTTTGCTGAACTGNAGTGGTGCTGGAGCTCATTTATTTNNNN
SNP_position 482
allele_1 A
allele_2 C
ASP_primer_S GCGGGCGGATAGCAACTTTGAGGGTGTGGCT
ASP_primer_L GCGGGCAGGGCGGCGGATAGCAACTTTGAGGGTGTGTCG
Common_primer AGCTAAGTTCTGCATGGCTTGGATG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 A A
Nakate Shinkuro C C
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_04 13.5
LWA2010 LWA_04 47.812
LWAE2012 E_04 45.275

DB Program Definition E-Value

EST Name Species Strain