+Marker Data: SOL7167

Crop eggplant
Population AL2010
Linkage Group E_03
Marker Type SNP
Map Position 62.8
Annotation
Source Name SmFL39A15A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TGTCACGGACAAGAAGGATGGATA
STS_primer_rev TGTGCAACAAACTCGAACGTGTAA
amplicon_seq CCGTATCNCATCTTTTGGGTGGCAGGTCATTCTTCACTTAATGACTATAATGTTCTCTGTTGGTTTTCTTTTAGTGTGTCTATTTTTCTTTATTCATTTTCTACCCTTGTTCAGGAAGTAGTTGTTGAAGGTGAAGATAAAGTTTTCAAAGATGTTATTGAACCACTAGAAAGTGTTAGCGTAAATTTGGTACCAAGCAGTAAAGAGAGTATACGAGATTTTGGTTCGCCGCAACAGGTATGTTAAAATGCTAGATCCTTTATCCCAGATATTTACATAAAAAAGGCTATATATAACTATTTGGATGTTTTGGATTATGTTTCCCCAAGTGATACTTAGATTTTTTCAGGTCAACTTCATGTTAATATTTGATTGTGGGCACTCATGAATGTGTCCTAAACAGAAATTATTCATATTGCAGGTTGCCGAAACTTTAATAAAAAAGTTTTTAGCATCGCCTTCTCAGAAAACAAAATTAATTGAAGCATCTGAGGTGTGTATTTTGATATTTCTTTCATTACTTAAAATTTGTAATCGATCCTTTACTGCTTATCATGCTGAATCATCATTGGTGTTACTGTTGAATAAACCTTTTGGAGCCTTAGGCATTTGTGTAACGAAAATGCTCTACTACCTACTAATCATCTACCTCCATGNTTTCCCATCTAGGGCCATATCCTCGGTGAGTTGTAGATACATCTTGTCATATTTAATCACCTCTCCCCAATGCTTCCTCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTACCTCTATCTCTCCTCAAACCTATCTCTGCCAACCTCTCGCACCTCCTCACTGAGGCATTTGTGTTCATCCTCTTCACATGCCCCATCTATCTCAGCCTCGTTTCCTGCTTCTCGTCCACCACGGCAGTTACTCCTATGTTGCCCTGCATGCCTTCGTTCCTAAAATTATCTCTTCTATAAGCATCCCTATTTCTGCTACCTCCATCTTCTGGATGTGCAAATATTTGACTGGCCAACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNATNGACAAAATTAACAATTAAGTNGCAGTTTAGCCNGTCATGAGTTCTTCATTCGNCTGTTGCCCTCCTNAATTAGTTTTAAATGCCAACCACTTCACAATTCTTGGAAAATATTTNAAAGCCATCTTGCATTGGATTGAATTACTTGAATAAAAAAANTAATTATTATATGATATCTCGAATCGTATACACTAAGGATCAGCTGTTGACAATTTGTATCATGTAAAATCAACAAGATGGTATAATCAATATTTTTCCAGTGTTTCAGAAGGNTGTATTCTTTTCTGNTTACTTGCATTTAACCATTTTGGAATACAAACTATCAGTTTCCATTGCAACCAGAGAAATGATTCACTCTTTCAATGATTCAATTTCTAGTTATTCTTGGATTGAGGTCATAAATTGCTTCGGTTGGTTTCACTGTAGTTAAAGTTAAGCTACTTCTGCAACTGCTATCATATCTATAAATGGCATATAGCTATCACAAGATAACTTACTTCTATACATGTTGGTACTGATCACCACGTTGTCTTACTTGAAATACATCACAACGAAATATGACAAGTAATCCCACCTAGTTGTGCTCCCTTTCGCCGTCTTTCCAGGAGGTAATGAGAACTTTTTAAAATGATAANNNTTCAACTTACACAACTCCCAACGAGAGAGAGTGAGCTTGACTGGAATGTTGATATTTCCAGTAAACAGCTTCTCAGCTCGACTTTTCTACCTGCTAGTATTGATTCTTCCTTAGAACTGGTGAGGCTTGGCATTTGGTTTTGTCAAATGATAAGCATGTTCCTGGTGCGCTCTACTGACTCTGGAAATCATGGCTTTGTTAGTAAAATGATAACTGGAATAAGATTCATCATGTGTTTGCATTATTCTGCAAGCTATTATTTTCCTTGTATGCTTACTACTTTTAATCATGTCTGTTTTGTCTAATATCAGCCTTTACATAACCATTTGATGTATCTAAATTTTTTTCGGGATCATTGTCTGATCATTTCGTAGCGTGA
SNP_position 1461
allele_1 C
allele_2 A
ASP_primer_S GCGGGCGCAACCAGAGAAATGATTCACTCTTTA
ASP_primer_L GCGGGCAGGGCGGCGCAACCAGAGAAATGATTCACTCTGTC
Common_primer ACCGAAGCAATTTATGACCTCAATCCA
enzyme Native Taq
dye SYBR Green I
Line allele-1 allele-2
AE-P03 A A
LS1934 C C
Nakate Shinkuro A A
WCGR112-8 C C
Population Linkage Group Position
AL2010 E_03 62.8
LWA2010 LWA_03 89.246
LWAE2012 E_03 92.475
DB Program Definition E-Value
EST Name Species Strain