+Marker Data: SOL6037

Crop eggplant
Population AL2010
Linkage Group E_05
Marker Type SNP
Map Position 46.2
Annotation
Source Name AE507P21F
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GGCAAGAAGGACCCTTTTTCACTT
STS_primer_rev TAAGTTTTGCCAATAGCGCCTTGT
amplicon_seq NACCTTCTAANTCCACCAATTTTCATTCAGGTTCTTGTTTAATTTAATCCTCCTTCCTTTTTTTGTTTTTGCCAGTTTTCATTTCTGTGTAATTTGTTTTTTGTTTCAGTATATGTATGTATAATTGTTTGCTTTGAAAGAAAATGAAGGAAAGTAACACCCCTTTGTTAATCTTGTTGAAAAACTGTATAATTGCATGCCATTGTTTTTTCTCAAATGGAAACTGTATAAGAGCCAATGTCCCTTCAGCTGATGATGGGTGTCCCATGTAACCCATACGCGCTATTCNATTCAAACTATGTATATATATTCAGGATTTGAAGTTTATAAGTTTGATTAGACATGACATGACATGACATGAAGTAATCTTCAATTTACTGAGGACGTATGGTGGTCGCAGATTAGGATAGAAGATTAGAGTTAGTTGACCATTGTCTCGTTTTTGTAGTTTGGGGCTCAATGCTGATAGGTCCTTGCATACCGGTCCTCTGGTATTATTAGTATTATTCTCATAGTTTCTTGCCCTTTGATCTCGGGTACTACCCGTTGTTTCGCGTGTGTTTGTTTTCATGNTATTTTGCTCTGAATGTTATGTTATGGTTTCTCTATTATTTGTGGTGTATTATTTACTGTTATATTCTCTTTTTCAAATTGCTTTGTTATACCTTACTTGAGTTGNGAGTCTTGTTGTTGAGTTTCTTCAACGACATTGAGTTAATACTACAATAGTAATGGTGTTCACAAGTAACTATTTATAGATATTTACTTAGTAGATTTCTCAGGGTTTAAGCAAAAGCTACTGGATTCGGTGAACCCACATGTTGTACTCTAGATCCTCCTCTGTATATATATATGAAGATTAGTGGGTATGGTGGTAGACTGAAAACAGTGACTTAACATATTGGATTTTCCTACCAATGGGAAATTGGAGTAGCATAATTATTATACAGTGCAGCTTTTGACCACCTGAATTGGGAGAAANNAGTGGATTGCTTAATGTGNCAAGTAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCTGTACTGTAGCCTTTNTCTNGTGATGAAATTGCATATTTTNGGCATNNCTCTGCTTTTNCTGTCTTNCCTTNGATGAAATCTGTTTACATTAGAATGTCAAATTTTNGCCGATAATAGGCAAATCTTCAGATCAAATCATTGACACTTAATTTAGCTGCATTGTCCCATTATTTGTAGGGAATATTCTTTGTAGGCAATGAAATAAGAATTGAACAAAGTATGGTACAACTGTTTGTCAGGAGAAATTTTGAATATTCTTTTGTTATGGTGGTAAAATCATACTTCACCTCTAGCAAATACTTGAAAGAAATAATAATATATTTGAACAATTTTCTTGCTGTACTGCTTCTACAATCTGCATCTGTTTTGTTTACTCAAGTCAGTTTTGTGACCTGTTCCTGATGATTATGCTCAAGCTCTCTGCTCGTTATTCCCCAATACCTTTTCAGGTGGTCATCGGGCTAGTTATGGAACTTNGCCACTTGTCAGTGGTGCCAAAACTGACGCTAGTCGTGTGACACATCTAGCTGCTATCCATAAAAGGTGCCTATCACAGTCTGCAACGGCACAAGATGACAACAAGATCAGCATAGGGCCTCGCAAAGGAGGTGGAGGAAATGATGAAAAGGATGGTGGAGTTGTCTACTATGGTCCTATCTCGAACACGATAAAGAATGTGAAGCTTCTGTCCCTTTCAACCTGTTGCCTCTCTGTGTCTTTAGGCCCTGTTATAACCTTCATGACATCTACTGATTCGAATGTGATACTAAAGGGAGCTGTTGCATCTACCGTTATATTCTTCAGTGCTTCTACTACCGCTGCCCTTCACTGGTTTGTGAGTCCTTATATTCACAAACTGAGATGGAAGCCAGGTTCAGATTCTTTTGAAGTGGAAATGATGTCTTGGCTGGCAACTTTTATTCCAAGGACAATTAAGTTTGCCGATATCAGGCCTCCTGATACCAATAGACCTTATGTAACATTCAAGGCTGACGGAAACTACTATTTGTNNNNNN
SNP_position 1572
allele_1 C
allele_2 T
ASP_primer_S GCGGGCTGACGCTAGTCGTGTGACACATCTAGT
ASP_primer_L GCGGGCAGGGCGGCTGACGCTAGTCGTGTGACACATCTCGC
Common_primer ATCTTGTGCCGTTGCAGACTGTGATAG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 T T
Nakate Shinkuro T T
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_05 46.2
ALF2 AL05 68.0
LWA2010 LWA_05 51.81
LWAE2012 E_05 40.846

DB Program Definition E-Value

EST Name Species Strain