+Marker Data: SOL5112

Crop eggplant
Population AL2010
Linkage Group E_09
Marker Type SNP
Map Position 92.4
Annotation
Source Name CAL05D11A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TTGATCATGTGTTCAATCTCGCTG
STS_primer_rev CTTGTGTTCCCACAACTTTGGATG
amplicon_seq AGGAGTAGGGCTTCATTCAGTCCACCACTCAGTGATCATGTATAACAACACTATGATCAGCTTTAACATGATGGAGGCTTCAAGAATAAACGGTATTAAGAGGTTAGCCAATCTCTCCTGCTCTATCCGGGAGTTTTGTTTAGTGTTTAGCGCCATACTAGTGTTCTAATGCAAAAGGCTACTGGTTATTTGTCAATCTTATAGTAATTTTTAAGATGAAAAGGTTATATGAACTTATGGATATTTCACTTGCAAAATTATAAATGGCTGAGCATCGTTTGGCATTCTTTCATTCTAAAACGATGGACTTACCTTAAAAAGGTGGAAGATGGGAGATAATGTTGCTGTCTAAATTCAGTGCTTTGCAACACCCTGCCCCCAGTGACTCGCGAGCAGAAGAAAACATTAATATTTATACACGTACCAATATAAAAGTTATTCATAATTCTCTGTGTTGGTTACTACTGCAATTTTCTTGTAGATAGTTGAGTCTACTAATATCAATTTGTTATGCAAGACCCCAAGTGCAGAAAGATGACAGAGTTGTTTCTATTTGTCGTACCCCTTTCCTTCTGGGTTCCATCACTTTCTTCTGCATGTACTGCCAATTTTTGTACATCTGCTATCCTTTTCTTATGTATAGTAAATAAAGCAAAATGCTATTACAAGTCATCTAGGAGCATGACAATCTACAACAATGGTCCTTTAAGAGGCAAAACAAACGCCGGGAAGATGGGATTTCAACCATGGACTC
SNP_position 326
allele_1 A
allele_2 G
ASP_primer_S GCGGGCACGATGGACTTACCTTAAAAAGGTGGA
ASP_primer_L GCGGGCAGGGCGGCACGATGGACTTACCTTAAAAAGGTGGG
Common_primer TTGCAAAGCACTGAATTTAGACAGCAA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 A A
LS1934 G G
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_09 92.4
LW2010 E_09 86.9
LWA2010 LWA_09 91.184
LWAE2012 E_09 75.524
LWF2_2022 E_09 102.6

DB Program Definition E-Value

EST Name Species Strain