+Marker Data: SOL5110

Crop eggplant
Population AL2010
Linkage Group E_01
Marker Type SNP
Map Position 116.9
Annotation
Source Name CPA01N23A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GTTGCTGCCCTTGTTTTTGGG
STS_primer_rev AGGCATCAGGCTCCTTTTTCAACT
amplicon_seq AGCTCAGTGGCCGCACTATTGGCAGACCGTCAAGAGTTTCCAACAGGTTAAATTTCCTCCAAAAAATAGTATTCATTTCATTGGATAGATAATTAAATAATGATATGTTTATACAATTAGGTCATTTGTGAGTTAATTATATGTTTCTGTGAATAGCTGACACTAGTAGTCTGGTAGAAATGGTAACTAACTGCTATGAATATCTGTCAATTAATTAACTGTGCTTTAACTAGAGATTTAATAACTTTAAGAAATGATAAACATTTTAGATTTCAGAATGATGGTAATTCATTTAGAAGTTTGGTCAAAAATCATGTTTTTCCTTAAACTTTTGGAATTTGAGAAGGGCGTAACTATGGGATAGTAGAATCAATGGTGCAAAGTAAACCAATCCAATAAATAATTCTCGCTGACCGATCCTGGAGGATGTTTTTGTATGTTTTGTGTTTATCTGATTGGTGTGTTGAGTTCTTAATTTTTGGCTTTTGGAAATGAGTTTAGTCTCTTGTGGGTGAAAAAGTAAAGGTCTAAAAAGTGGAGAAAGGATCAAACATCTAATCAACCTGGATGCATAAATAGTTCTTGATGTTGGAGACAAGATTTGTGATTTCATGCGTAACTGAATGTGTTCTTTCTATGAGCTTGGCTGGAAGAAGAAATTCAAATAAAAACAAATGTGCTGGTTGTAATAGATGCTTGGCCTTTTTGGTTTCTTTTGTTCTTCCAACAGAGGAAGAGAATAGGGTTTTC
SNP_position 381
allele_1 A
allele_2 G
ASP_primer_S GCGGGCTATGGGATAGTAGAATCAATGGTGCAA
ASP_primer_L GCGGGCAGGGCGGCTATGGGATAGTAGAATCAATGGTGCAG
Common_primer CCAGGATCGGTCAGCGAGAATTATTTA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 A A
LS1934 G G
WCGR112-8 G G

Population Linkage Group Position
AL2010 E_01 116.9
ALF2 AL01 104.8
LWA2010 LWA_01 100.398
LWAE2012 E_01 101.576
NAF2 NA01 92.6

DB Program Definition E-Value

EST Name Species Strain