+Marker Data: SOL5248

Crop eggplant
Population AL2010
Linkage Group E_02
Marker Type indel
Map Position 79.1
Annotation
Source Name OVS06F07C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method indel
Marker_Class SOL
STS_primer_fwd GTGTGATTGCTGATGGTGTTGATG
STS_primer_rev TTCAACTGCTTCTTGTAGTCCGCC
amplicon_seq NNGTTCTTACTATTTATTCGAAAATTTTCAAAGATTACCATTAACTCTAAAACACAGATCGATAAGCATGTGCCTTGAGTGATTAATATTGGCCAATTATCATTTCTTCTAATAACTATAGCTGATACATTGTACAAATTCCAAAAATTCTCATAGTTGTTTTGGGGCCTGCAAGTTTGCCCACAAATATATGAATTTGAGATTAGACAACGATAGGGTTATACATTTGACTAGTTTGATATTTCTAATTTTATGATGAACGGAGCATCTGAATGTAAGGTTTTATATAGGTTTCCCTATGTGTCAAAAGGCTCGTGTACACCAACGACAAAGGGGAGGAAGTTAAAGGAGTTTGCTCAAACTTCTTATGTAAGAATCAACGACTCCCTAATTTCATAGACGATGTTAAGGTTTATCTGTTTTAGTTTAGTTTGACTGGGCCTAACATATAGTAGGAGTACTAGACTATGCTTGGCTTGTACTTAGTAAATTCAAATGTTATATTATTCAGGTGACTTGAAGCCTGGAGCAGAGGTCAAGATTACTGGACCTGTTGGCAAGGAAATGCTCATGCCAAAAGATCCAAATGCCACTGTTATAATGGTGAATTTTATTTGCAGCTACATGATTGTCATCTAAGATATTTTCGCTGCTTTTCAATTTGACTATGCATTTTTTTCTAATTTGCATTTGTCTCTCAGCTTGCCACTGGAACTGGAATTGCTCCTTTCCGTTCATTCTTGTGGAAAATGTTCTTTGAGAAACATGAGGATTACAAGGTACACAAAATAAACGTTTGTGTGACTGTTTCTCTTCATTCTTAATATGATTGGCTTCAGCACTTGCTATGGGAAAATGAGAAGAACTAAAAGAAAAAAATTGCTTGGTTACTGTCAAAAGCCCTTTTCTTGTCTGAACTAAAGCTCAAGAAACTTAATAGGCCAAGATGATGTGTGTCTGTTTAAGTTTTCTATCTAATGTGGTCAAGTTACACATAAATGTAAGAGTTTCAGATGGACAAAATGGTAAACGATTATGATGTCTCAGTCAAGGATGAATGGTTATTAAACATTTAAAATGTCCTACATTAGTTTATTCAAAGGTTGTGGGATTACATTGGGTATGTAGTTGTTGTGGTTTAGGTTTATTCAAAGGTCCGCCAGTATATCATTGTAGGCATATGCAGCATTTTCATACCTCTGATCATTAATCTGAATGACTTGATTTGGTGTTATGTAGTTCAACGGTTTGGCATGGCTTTTCTTGGGTGTTCCCACCAGCAGCTCACTACTTTACAAGGAGGTGATTTTCGAGCATATGATCATTACTGTTCACTGCTGAATCAAAGTATTTCTAGTAAAGTTGATCAATAGTTTGAACTTGGGACTATTCATGTTTCTATGTTGTAGGAATTCGAGAAAATGCAGGAGAAGGCTCCGGATAACTTCAGATTGGACTTTGCGGTGAGCAGAGAGCAAACAAATGAAAAGGGGGAAAAGATGTACATTCAAACCAGAATGGCTCAATATGCTGAAGAACTGTGGAGTTTGCTCAAGAAAGACAACACCTTCATCTACATGTGTGGTCTCAAGGGCATGGAGCAGGGAATTGATGACATTATGACTTCACTTGCTGAAAGAGATGGTAACATATGTCCAAATTATGTCGTCATTTTTTAAATATAATCCTCNN
indel__position 472
Indel_primer_fwd CGACAAAGGGGAGGAAGTTAAA
Indel_primer_rev GCTCCAGGCTTCAAGTCACCT
Line allele-1 allele-2
AE-P03 wt wt
LS1934 DEL5 DEL5
Nakate Shinkuro wt wt
WCGR112-8 DEL5 DEL5
Population Linkage Group Position
AL2010 E_02 79.1
LWA2010 LWA_02 62.583
LWAE2012 E_02 62.583
DB Program Definition E-Value
EST Name Species Strain