+Marker Data: CSN114

Crop cucumber
Population CSRILs
Linkage Group 1
Marker Type SSR
Map Position 14.5
Annotation
Source Name 050122C
Source Type cucumber_genomic
Source Sequence ggcggccgcgaattcactagtgattgtttagccttgtagc agaagctttctatctttcttgaccttctcattgaaatgtt agattcaaATATATtgatgattagttccATATATTATATA TAaaagagatgtttttgctttttatgaaaattttggtttt taccttttgattaattagtcactgagtcagctttaagaaa tatacatacatcaattctttcaatcatcttaaacccttta aacccttttagttaattaagttggttttgaggttctatct actcgactttgttatgtgatttgattagagtattaacatg attaaatcaatagatttttatgacagcatttgagttgttg atcataatcaattattttctcttcctctttggtccttgaa agaaacaatattttgagtctgtaaaacaaaaaaaacaaaa aaaaagcaaattctaaacctaatttgcaaaaacagatgct tagttcctttcaaaattcgaggcaaaaccctaattgaaaA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGaaagaaagg agctttcacatcaaatgaagagaagagaagagaagtgatt gCTCTCTgtatcacaccctcttacatcattggatcAGAGA GtcagattttttgttgacttttttttTCTCTCaaaatttc aaattatatcTATATAaaattaaaacctggccaattcata atctcataattgtgagaatgtttcttTCTCTCTATATAtc aatttctttttctattgatttcttttttcagctaactctc catgtgatctttctgctaactTCTCTCctcttttaccatt ttaattTCTCTCTCaattctagtttgatgtttgacgtaac atgtcgaatcgattaatgtatagtttaggtattatgatta aacagattacgtttcaagcaaattcggctaattgaattat tatggatagttggataactacgaaattctttcgcattaat tcagttcaagtgttttatggTATATAcatttataggtggt tagagtgcttctgctacaaggctaaacaat
Developer NIVTS
Document Fukino et al. 2008

motif (ag)16
PCR product (bp) 150
fwd primer CSN114-F
fwd primer seq. ctttcaaaattcgaggcaaaaccc
rev primer CSN114-R
rev primer seq. Tgatccaatgatgtaagagggtgtg
fwd primer_for postlabel CSN114-FC
fwd primer seq._for postlabel cttctttcaaaattcgaggcaaaaccc
rev primer_for post label CSN114-RC
rev primer seq._for post label ttTgatccaatgatgtaagagggtgtg

Line allele-1 allele-2
AR_5 96 96
Harukei3 96 96
Nou4 100 100
PI 154 154
Santou 153 153
hardwickii 160 160

Population Linkage Group Position
CSRILs 1 14.5

DB Program Definition E-Value

EST Name Species Strain