+Marker Data: emh11O09

Crop eggplant
Population AL2010
Linkage Group E_07
Marker Type SSR
Map Position 15.1
Annotation
Source Name emh11O09
Source Type genomic
Source Sequence ACTATGTATATCATAACATGTATGCAGTTGGGGTATGAAC CAATTAGTGGTTAACATTCTTCCCAAAATTTGACACAAAG AACCAACTAATCTAGCTGTCCTCAAATTTTCAGGTGTTAG GATGGATTCTTAAACTGCCAAACCATGGAAAAACGGAATT ACTGGTAATCTTCATATTTTCATACTTGTTTGTGATAAAT GATAAATCAAATATCATTCAGTGAATTAGAGCAAGTTGGT GTAGCTATTCAAAAGTGAGTTGATATTAGTATGCATCGGA CCACCCAAAGCGTAGCCAATTATCTGGTTTTTTTTTTTTT TTGAGAATGGTAACTTTTTTCTATTTTATATATATATATA TATATATATACACACACACACACACACACACACACACACA CAGGTATACTACATTAAAGTAGTCCCCCTAGCAAAAACAA TTACAAGTTGAATATACACTATCAGTCCTTTTTGTCACAG ATAGTCTAATATATCAAATAAATCCTCTACCTAACCTAGG ACTTCCTATTTACAATAGAAATAATAAAGGGCTAAACAAT CATCTTAAAGGTCTGT
Developer NIVTS
Document Nunome et al. (2009) Development of SSR markers derived from SSR-enriched genomic library of eggplant (Solanum melongena L.). Theor. Appl.Genet. 119: 1143-1153

motif (ta)11t(ac)16
PCR product (bp) 163
fwd primer emh11O09/U
fwd primer seq. ccaaagcgtagccaattatctggt
rev primer emh11O09/L
rev primer seq. cttgtaattgtttttgctaggggga
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq

Line allele-1 allele-2
AE-P03 170 170
EPL-1 170 170
LS1151 (S.linneanum)
LS1934 168 168
LS4021 (S. incanum) 146 146
Nakate Shinkuro 168 168
Senryo 2 168 168
Shironasu 180 180
WCGR112-8 182 182
White Egg 182 182

Population Linkage Group Position
AL2010 E_07 15.1
LWA2010 LWA_07 37.309
LWAE2012 E_07 31.873

DB Program Definition E-Value

EST Name Species Strain