+Marker Data: emg11F21

Crop eggplant
Population AL2010
Linkage Group E_08
Marker Type SSR
Map Position 28.2
Annotation
Source Name emg11F21
Source Type genomic
Source Sequence CCTCAAAATCGATGGCTTAGGTCGAGGTTCCGTTGAAGAT TCTTCGGCATATTCCTTCAAGTGCTGAATGGATTTGATTT AGGAAATTTGAAATTCAATTGAATTTCCTTCAAATTTCCT ATTTTGACCCCATTTTCAACTCTATTTTTACCCCTTATAT AAACACCATCTTTGCTCTTCGGAAGGGGCTGCTTCACACA CACACACACACACACACACACACACACACACATATATATA TATATATGTATATTCTACTTCCATTCAAAGAAGAAAAGAA TGTTTGAATCCTTAGGGTTACAGTTCCTAGTAAAAATTTC CGAATTACTACTTTTCAGATAGTGGTGTTGACTTGTCATG ATTAAACCTTCATGTTAAGCTCATTGTCTCTGGTTCGTTG CTTTAGAAAAGGGCTATTTATGCATGTGGAGTCATGTTTT GATAGCTAAATGCCATACAGTTGGATCTATAAATGTAGTA TCCCAGGACTTCTTCATATATATCTTTTGTTTCAAGTAAA AATAGATGCTTATGTAATTTCATCTTCTTTTTGCACATGT GGCAATCGTTCGAGTCCCCTTGGAATGCCCTTTGCACACC ATCAAGCTATTTTCTCCTCAAGTCAGTCCATTGCTTCATA ATGGAAGCAACATACAGGTATCCAACAGTGATATATGATA CAAGTGGAAAATAGGATTGTATACACTAATATACAACGTA TATACAACATTGGTATACAAGGATAGAACTAGG
Developer NIVTS
Document Nunome et al. (2009) Development of SSR markers derived from SSR-enriched genomic library of eggplant (Solanum melongena L.). Theor. Appl.Genet. 119: 1143-1153

motif (ac)18a(ta)7
PCR product (bp) 256
fwd primer emg11F21/U
fwd primer seq. taaacaccatctttgctcttcgga
rev primer emg11F21/L
rev primer seq. agcccttttctaaagcaacgaacc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq

Line allele-1 allele-2
AE-P03 259 259
EPL-1 263 263
LS1151 (S.linneanum)
LS1934 261 261
LS4021 (S. incanum) 246 246
Nakate Shinkuro 259 259
Senryo 2 261 261
Shironasu 261 261
WCGR112-8 261 261
White Egg 257 257

Population Linkage Group Position
AL2010 E_08 28.2
LWA2010 LWA_08 30.86
LWAE2012 E_08 31.318

DB Program Definition E-Value

EST Name Species Strain