+Marker Data: emf11L21

Crop eggplant
Population AL2010
Linkage Group E_09
Marker Type SSR
Map Position 111.4
Annotation
Source Name emf11L21
Source Type genomic
Source Sequence TAGGCCTTGCTAGCAGAAGCCTAGGTAACGTACCCCTCGT TATCCTCTTGTTTTGGTACTGGTTGGTTAGGTCATTTTGT ACAGATAAACTTAGCAATGACCTAGCAAGATAGAATGTTA TCTGCTCAATATGTACATTTAGTTTTATGTACCTTATGGC TATCATGGAATTGAAGGAAAATCGGATTTTCGAAAAGCCA ACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTAGAATGAATGAATGAGCAATGAGTTGTATTC TAACTATGAAAAGCCCAGGAAATAGAGCCTATAGCCATAT GGCTACCAACTTCCTTAGATTTCATTCATGTTGGCTGATG TGAGTCCTTGAGAG
Developer NIVTS
Document Nunome et al. (2009) Development of SSR markers derived from SSR-enriched genomic library of eggplant (Solanum melongena L.). Theor. Appl.Genet. 119: 1143-1153

motif (tc)23
PCR product (bp) 294
fwd primer emf11L21/U
fwd primer seq. gaagcctaggtaacgtacccctcg
rev primer emf11L21/L
rev primer seq. ggctctatttcctgggcttttcat
fluor. primer emf11L21/U_PET
dye PET
fluor. Primer seq. PET-atagcctaggtaacgtacccctcg
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq

Line allele-1 allele-2
AE-P03 295 295
EPL-1 295 295
LS1151 (S.linneanum) 295 295
LS1934 293 295
LS4021 (S. incanum) 340 340
Nakate Shinkuro 295 295
Senryo 2 291 295
Shironasu 293 293
WCGR112-8 299 299
White Egg 293 293

Population Linkage Group Position
AL2010 E_09 111.4
EW2009 LG06 6.0
LW2010 E_09 104.1
LWA2010 LWA_09 108.978
LWAE2012 E_09 92.832
LWF2_2022 E_09 121.6

DB Program Definition E-Value

EST Name Species Strain