+Marker Data: eme05F08

Crop eggplant
Population AL2010
Linkage Group E_07
Marker Type SSR
Map Position 14.3
Annotation
Source Name eme05F08
Source Type genomic
Source Sequence CCATAGAGGGGTATCATAGAAGCCAAGTCCAGAATTGAAG CAACAAAGTACGAAAGTCCGACTACGAGCCGTAAATTAAT ATACAGCTTGTAGAGCATCTCATGAAGCCTGCCGACCCAG TTATCTTATTTTGTTTTGGATTTGTATTTAAAACATTATA GATAGGTTTTTAGGTTATTTTTCTTAAAGAGTAAGGAGAG AGAGAGAGAGAGTAGAGTCAGCGAATTCAGAGTGAGAAGC AGTAGAGAAAAACATTGGAAGGTTGAGAGACACTTGTAAA CTTTAATTTCATCTCTTAGTTACAACCTTGTGATTCTCAT TG
Developer NIVTS
Document Nunome et al. (2009) Development of SSR markers derived from SSR-enriched genomic library of eggplant (Solanum melongena L.). Theor. Appl.Genet. 119: 1143-1153

motif (ag)8
PCR product (bp)
fwd primer eme05F08/U
fwd primer seq. gaaagtccgactacgagccgtaaa
rev primer eme05F08/L
rev primer seq. ctgcttctcactctgaattcgctg
fluor. primer eme05F08/U_VIC
dye VIC
fluor. Primer seq. VIC-ACGAAAGTCCGACTACGAGCCGTAAA
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq

Line allele-1 allele-2
AE-P03 197 197
EPL-1 197 197
LS1151 (S.linneanum) 193 193
LS1934 199 199
LS4021 (S. incanum) 192 192
Nakate Shinkuro 197 197
Senryo 2 197 197
Shironasu 197 197
WCGR112-8 197 197
White Egg 197 197

Population Linkage Group Position
AL2010 E_07 14.3
LW2010 E_07 37.0
LWA2010 LWA_07 37.674
LWAE2012 E_07 31.574
LWF2_2022 E_07 40.4

DB Program Definition E-Value

EST Name Species Strain