Crop | eggplant |
---|---|
Population | AL2010 |
Linkage Group | E_08 |
Marker Type | SSR |
Map Position | 40.6 |
Annotation | |
Source Name | EMB01O19 |
Source Type | genomic |
Source Sequence | GTTGCTTACATGAAGTGGTTGGAGTGTAGGGATGAAGATG AAAAGCAAAGAATTAAGGAGATCTATACAACAGCTAAGTC GAAAGCGAAGATGGCGGTGACGAGTGCTAAGATAGCAGCG TTTGAGCACCTATATGAGGAGCTAAGTGGTAAAGGCGGGG ACAACAGATTGTATAGGCTTGCTAAGGAGAGACAGAGAGA GAGAGAGAGAGAGGAAAGCTCGCGACTTGGACCAAGTGAA GTGTATCAAAGATGAGGAGGGCGAGGTGTTGGTGGATGGC ACTTCCATTAGACTAAGGTG |
Developer | NIVTS |
Document | Nunome et al. (2009) Development of SSR markers derived from SSR-enriched genomic library of eggplant (Solanum melongena L.). Theor. Appl.Genet. 119: 1143-1153 |
motif | (AG)10 |
---|---|
PCR product (bp) | 163 |
fwd primer | |
fwd primer seq. | cgagtgctaagatagcagcgtttg |
rev primer | |
rev primer seq. | cgccctcctcatctttgatacact |
fluor. primer | |
dye | FAM |
fluor. Primer seq. | FAM-CGAGTGCTAAGATAGCAGCGTTTG |
PCR condition | 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C |
polymerase | Roche Taq |
Line | allele-1 | allele-2 |
---|
Population | Linkage Group | Position |
---|---|---|
AL2010 | E_08 | 40.6 |
LWA2010 | LWA_08 | 42.757 |
LWAE2012 | E_08 | 43.488 |
DB | Program | Definition | E-Value |
---|
EST Name | Species | Strain |
---|