Crop | bunching_onion |
---|---|
Population | |
Linkage Group | |
Marker Type | SSR |
Map Position | 12.7 |
Annotation | |
Source Name | AB499333 |
Source Type | genomic |
Source Sequence | |
Developer | NIVTS |
Document | Ohara et al. (2005) Euphytica 144:255-263 |
motif | (ac)8 |
---|---|
PCR product (bp) | 163 |
fwd primer | AFS131-F |
fwd primer seq. | caacaaatcagagagaaacagatga |
rev primer | AFS131-R |
rev primer seq. | actgtatatttatgtatcactccatgtaaa |
fluor. primer | AFS131-F(VIC) |
dye | VIC |
fluor. Primer seq. | VIC-caacaaatcagagagaaacagatga |
PCR condition | 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C |
polymerase | Toyobo rTaq DNA polymerase |
Genebank No. | AB499333 |
annotation | |
similar marker | |
product size in J | 160 |
product size in Kaizuka-Wase | 160 |
product size in Iki-White | |
product size in Tender Pole |
Line | allele-1 | allele-2 |
---|---|---|
C1s-11s-25s-7 | 161 | 163 |
Cho1s-1s-2s-2s-8s | 161 | 161 |
D1s-15s-10s-8 | 161 | 161 |
F1s-7s-17s-3s-1 | 161 | 161 |
J1s-14s-23s-9 | 163 | 163 |
K1s-5s-2s-2s-4s-5 | 159 | 159 |
Chiang_mai | 157.36 | 157 |
Kaizuka_Wase |
Population | Linkage Group | Position |
---|---|---|
DJF2 | ChrX | 75.8 |
FA | 5b | 36.6 |
KiCF2 | 5b | 137.5 |
P1 | J08 | 20.1 |
P2 | D08 | 12.7 |
SaT03 | 5b | 106.6 |
DB | Program | Definition | E-Value |
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EST Name | Species | Strain |
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