Crop | bunching_onion |
---|---|
Population | |
Linkage Group | |
Marker Type | SSR |
Map Position | 26.4 |
Annotation | |
Source Name | AB499329 |
Source Type | genomic |
Source Sequence | |
Developer | NIVTS |
Document | Song et al. (2004) Breed Sci 54:361-365 |
motif | (tg)3tt(tg)7 |
---|---|
PCR product (bp) | 193 |
fwd primer | AFS109-F |
fwd primer seq. | acctatgtctttacctatccaaccaaca |
rev primer | AFS109-R |
rev primer seq. | ccgaatttcaagtgtgtcaagtttt |
fluor. primer | AFS109-F(VIC) |
dye | VIC |
fluor. Primer seq. | VIC-acctatgtctttacctatccaaccaaca |
PCR condition | 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C |
polymerase | Toyobo rTaq DNA polymerase |
Genebank No. | AB499329 |
annotation | |
similar marker | |
product size in J | 190 |
product size in Kaizuka-Wase | 190 |
product size in Iki-White | 190 |
product size in Tender Pole | 190 |
Line | allele-1 | allele-2 |
---|---|---|
C1s-11s-25s-7 | 189 | 197 |
Cho1s-1s-2s-2s-8s | 197 | 197 |
D1s-15s-10s-8 | 197 | 197 |
F1s-7s-17s-3s-1 | 195 | 197 |
J1s-14s-23s-9 | 195 | 195 |
K1s-5s-2s-2s-4s-5 | 193 | 193 |
Chiang_mai | 197 | 226 |
Kaizuka_Wase |
Population | Linkage Group | Position |
---|---|---|
DJF2 | ChrX | 70.7 |
KiCF2 | 5b | 134.5 |
P1 | J08 | 42.7 |
P2 | D08 | 26.4 |
SaT03 | 5b | 102.5 |
DB | Program | Definition | E-Value |
---|
EST Name | Species | Strain |
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