+Marker Data: AFS109

Crop bunching_onion
Population
Linkage Group
Marker Type SSR
Map Position 26.4
Annotation
Source Name AB499329
Source Type genomic
Source Sequence
Developer NIVTS
Document Song et al. (2004) Breed Sci 54:361-365

motif (tg)3tt(tg)7
PCR product (bp) 193
fwd primer AFS109-F
fwd primer seq. acctatgtctttacctatccaaccaaca
rev primer AFS109-R
rev primer seq. ccgaatttcaagtgtgtcaagtttt
fluor. primer AFS109-F(VIC)
dye VIC
fluor. Primer seq. VIC-acctatgtctttacctatccaaccaaca
PCR condition 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499329
annotation
similar marker
product size in J 190
product size in Kaizuka-Wase 190
product size in Iki-White 190
product size in Tender Pole 190

Line allele-1 allele-2
C1s-11s-25s-7 189 197
Cho1s-1s-2s-2s-8s 197 197
D1s-15s-10s-8 197 197
F1s-7s-17s-3s-1 195 197
J1s-14s-23s-9 195 195
K1s-5s-2s-2s-4s-5 193 193
Chiang_mai 197 226
Kaizuka_Wase

Population Linkage Group Position
DJF2 ChrX 70.7
KiCF2 5b 134.5
P1 J08 42.7
P2 D08 26.4
SaT03 5b 102.5

DB Program Definition E-Value

EST Name Species Strain