+Marker Data: AFS105

Crop bunching_onion
Population DJF2
Linkage Group Chr1a
Marker Type SSR
Map Position 77.0
Annotation
Source Name AB499328
Source Type genomic
Source Sequence
Developer NIVTS
Document Song et al. (2004) Breed Sci 54:361-365

motif (ac)3aa(ac)10
PCR product (bp) 275
fwd primer AFS105-F
fwd primer seq. actttcgttgcaaacatttacacacac
rev primer AFS105-R
rev primer seq. gtggagtttacttccccaaatgaag
fluor. primer AFS105-F(NED)
dye NED
fluor. Primer seq. NED-actttcgttgcaaacatttacacacac
PCR condition 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499328
annotation
similar marker
product size in J 250
product size in Kaizuka-Wase
product size in Iki-White 280
product size in Tender Pole 240

Line allele-1 allele-2
C1s-11s-25s-7 289 289
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 289 289
F1s-7s-17s-3s-1 273 273
J1s-14s-23s-9 273 273
K1s-5s-2s-2s-4s-5 279 279
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr1a 77.0
SaT03 1a 79.6

DB Program Definition E-Value

EST Name Species Strain