Crop | bunching_onion |
---|---|
Population | DJF2 |
Linkage Group | Chr1a |
Marker Type | SSR |
Map Position | 77.0 |
Annotation | |
Source Name | AB499328 |
Source Type | genomic |
Source Sequence | |
Developer | NIVTS |
Document | Song et al. (2004) Breed Sci 54:361-365 |
motif | (ac)3aa(ac)10 |
---|---|
PCR product (bp) | 275 |
fwd primer | AFS105-F |
fwd primer seq. | actttcgttgcaaacatttacacacac |
rev primer | AFS105-R |
rev primer seq. | gtggagtttacttccccaaatgaag |
fluor. primer | AFS105-F(NED) |
dye | NED |
fluor. Primer seq. | NED-actttcgttgcaaacatttacacacac |
PCR condition | 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C |
polymerase | Toyobo rTaq DNA polymerase |
Genebank No. | AB499328 |
annotation | |
similar marker | |
product size in J | 250 |
product size in Kaizuka-Wase | |
product size in Iki-White | 280 |
product size in Tender Pole | 240 |
Line | allele-1 | allele-2 |
---|---|---|
C1s-11s-25s-7 | 289 | 289 |
Cho1s-1s-2s-2s-8s | ||
D1s-15s-10s-8 | 289 | 289 |
F1s-7s-17s-3s-1 | 273 | 273 |
J1s-14s-23s-9 | 273 | 273 |
K1s-5s-2s-2s-4s-5 | 279 | 279 |
Chiang_mai | ||
Kaizuka_Wase |
Population | Linkage Group | Position |
---|---|---|
DJF2 | Chr1a | 77.0 |
SaT03 | 1a | 79.6 |
DB | Program | Definition | E-Value |
---|
EST Name | Species | Strain |
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